Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01991 ATGACTCCTCGCGTCGGCGATTTCGAAAACGACAATCTGTCCTCCACCGACGACGATGACGACGACGGCTTCAAGGAAGATATGGCCGCGCTCTCCCGAGCCTGCATGATCGTTGTCCCAGGCGCCGATGATTATTCCGCAGCTGAAGACGATGTTCCGCCGATGGTCCCTCTCACTGATGACGCCGGCACTGCTATTGTTCCCGTGGCCACCGATTCCGACTCCGACGACCAGGACGACCTCGAATGTCTCAAGAGAGTGCAGAGCCTTTACCAGCCTCTGTCCGTTCTTCCGCCGCTTGAGCCGGCGGTGGCCGTGTCTGACGATGACGATGACGTGGATGATCTCGAGACCGTGCGCGCCATCATGAAAAGGTTTGGCGACTACAACGAAGGTGGAATAAATAAGTTGGTTGAGGAGGATCAGATTTCCAGCCTGGGCTGTGAGGGTGACATTGCTAATGGCTCAATCCATTACGAATCAGATGGTGGTGAATTATGTCCTATTTCTCAAGATCCTAACGAGGCTGCCACAGAGGAATTGATTGAAAACATTGAGATGCAGCTTAGTGATTTTGTTGAGAGTTCTGAACCGGATGCCTGGGAGTTGACCACATTACCACAGAAAAAAATGAGCTGTCCTCCTGTTGTTCAGTGTTTTATTGATGCCATTAAAAAAAATAGGGATTTGCAGAGATTTCTTAGAGGCAAATTGATTGAGCTTGAGGCTAAAATTGAGGAAAGCAAAAAGATAAGGAATAAAATTAAAATTCTGAAGGACTTCCAGGCTTCCTGCACTAGAAGAACAGGGAATATATTATCACTGAAAAAAGATCCACGTGTTCAATTAATATCTGCAAAAAGGTCTTCTGCTCGGAAGAAGTCTAAGAAACATAAAAAGGTACCTGCAATGTGTTATGGCCCAGAAGAAAATTCTCGTGTTGCTAACTATAGGATGGTATTGGAAAGATTTCCACTTTCGTTGGATCGGAAAAAATGGTCTATGGTAGACAGGGGAAATCTTTTTAAGGGAATTAAGCAACAATTCCAAGAAATGGTACTTCAACTTTCACTTTCACTTGATAGAACAAGTTCTGAGGGCTTGCTTGGAGATGCTGATGACATGGATAATATAATTGCATCTGTTAAAGATCTTGAAGTCACACCAGAGAGGATTAGAAAATTTTTGCCTAAAGTTAATTGGGATCTGATGGCTTCTATATATGTTGGTGGCCATACTGGTGCTGAATGTGAATCAAGGTGGTTGAATTATGAAGATCCTTTGATCAACCAAGGTGCATGGACTAAGGAAGAGGACAGGTCCCTTTTACTTATTGTCCAAGATATGGGCATCAGGAACTGGTTCAATATTGCTTCATCATTGGGCACAAGCAGGACTCCATTTCAATGTTTGTCACGATTCCAAAGGAGTTTAAATCCTTCAATGCTAAATAGTGAATGGACTGAGGAAGAGGATGCTCAACTATGTTCTGCTGTGACATATTTTGGTGATGGCAATTGGCAGTGTGTGGCTTCTGTTTTAGAACGGCGAACAGGAACCCAGTGCTCAAATAGATGGAAGAAATCCCTTTGTCCTGAGAAGAAAGGGAGCTTTACACCAGAGGAAGATATACGCTTAACAGTAGCTGCTATGCTTTTTGGGCGGAAATGGAATCAAATAGCTAAATATGTTCCTGGCCGGATCCAATCTCAGTGTAGGGACAGATACCTCAATAGTCTGGATCCTTCTTTGAAATGGGGTGGATGGACTGAGAAAGAGGATTTAAGATTAGAAGCTGCAATTGCCAAGCATGGATATTGTTGGTCTAAGATTGCTGAAGAAGTGCCTCCCCGAACGGATTCTCAATGCCGAAAGAGATGGAAAGTGTTATACCCTGAACAAGTTCCTTTGCTTCAAGAAGCAAGAAAGAAGCAAAGGGCTATTATTGGTGGTAACTTTGTTGATCGAAAATCTGAACGTCCAACCATTACACTTAATGACTTTCTACCTTTACTTGCATTAGCTCCAAAATCTGATGTTGGTGCTTCAGACATCTGCAAGAAGCGCAAGACCAGCAATGTTCCCAAGAAAACGAGCTCTAAGAAAGGTGCAAAGAGAACTCAACGTACCAAAGAAGTACGAGATACAGAGGTATATCATGATGATGAGCTCTACCCAGTCTCTACATGCAGCAATCTTCCCAAAAAGAAGATGGGGTCCAAAAGACGTATAAAAAGTAGTCGAAATCCTCCCCAAGAATTAGTGGATATCTCTTGTAGTGACAAGGTCACTTACATTGAGGGTTCAGAAAACCAATCTACCTATATTCCGAATTCTGAAAATCAAGATTCAGACAACATACCCCTTGCATGTTTTTTACGCAAGAAATCAAATGAGATATTATCTAGATTTAACAAAAAATTAAGTCAAACTTCCTTCTCTAGGATTACTGATGTTCCTGAGCAGGTTGAAAGTCAAAGCGCATCTGATGATCAAGGCGGCTTGCCTCATTCTTGTGAAACTGTTGGAACTAAAAAATTGCTTGTGCAGCCGAATGTTGCTTCTGATAGACGAGTGAGAAGCCAAGAGGATACAAATACTTTGACATGTGATGATGACGACGATGACCATATGACCCTTGCATGCTTTCTAAAAAACAAGCCAAAGAAAGAGGTCAACCTGCTAAAGGACATGTGA 2697 0.4283 MTPRVGDFENDNLSSTDDDDDDGFKEDMAALSRACMIVVPGADDYSAAEDDVPPMVPLTDDAGTAIVPVATDSDSDDQDDLECLKRVQSLYQPLSVLPPLEPAVAVSDDDDDVDDLETVRAIMKRFGDYNEGGINKLVEEDQISSLGCEGDIANGSIHYESDGGELCPISQDPNEAATEELIENIEMQLSDFVESSEPDAWELTTLPQKKMSCPPVVQCFIDAIKKNRDLQRFLRGKLIELEAKIEESKKIRNKIKILKDFQASCTRRTGNILSLKKDPRVQLISAKRSSARKKSKKHKKVPAMCYGPEENSRVANYRMVLERFPLSLDRKKWSMVDRGNLFKGIKQQFQEMVLQLSLSLDRTSSEGLLGDADDMDNIIASVKDLEVTPERIRKFLPKVNWDLMASIYVGGHTGAECESRWLNYEDPLINQGAWTKEEDRSLLLIVQDMGIRNWFNIASSLGTSRTPFQCLSRFQRSLNPSMLNSEWTEEEDAQLCSAVTYFGDGNWQCVASVLERRTGTQCSNRWKKSLCPEKKGSFTPEEDIRLTVAAMLFGRKWNQIAKYVPGRIQSQCRDRYLNSLDPSLKWGGWTEKEDLRLEAAIAKHGYCWSKIAEEVPPRTDSQCRKRWKVLYPEQVPLLQEARKKQRAIIGGNFVDRKSERPTITLNDFLPLLALAPKSDVGASDICKKRKTSNVPKKTSSKKGAKRTQRTKEVRDTEVYHDDELYPVSTCSNLPKKKMGSKRRIKSSRNPPQELVDISCSDKVTYIEGSENQSTYIPNSENQDSDNIPLACFLRKKSNEILSRFNKKLSQTSFSRITDVPEQVESQSASDDQGGLPHSCETVGTKKLLVQPNVASDRRVRSQEDTNTLTCDDDDDDHMTLACFLKNKPKKEVNLLKDM* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01991 898 MobiDBLite consensus disorder prediction 686 713 - -
Phac4g01991 898 SMART sant 534 582 IPR001005 -
Phac4g01991 898 SMART sant 329 427 IPR001005 -
Phac4g01991 898 SMART sant 585 633 IPR001005 -
Phac4g01991 898 SMART sant 483 532 IPR001005 -
Phac4g01991 898 SMART sant 430 480 IPR001005 -
Phac4g01991 898 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 479 534 IPR017930 -
Phac4g01991 898 SUPERFAMILY Homeodomain-like 482 576 IPR009057 -
Phac4g01991 898 SUPERFAMILY Homeodomain-like 560 632 IPR009057 -
Phac4g01991 898 Gene3D - 534 586 - -
Phac4g01991 898 ProSiteProfiles Myb-like domain profile. 479 530 IPR001005 -
Phac4g01991 898 Gene3D - 485 533 - -
Phac4g01991 898 SUPERFAMILY Homeodomain-like 408 475 IPR009057 -
Phac4g01991 898 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 581 635 IPR017930 -
Phac4g01991 898 Gene3D - 428 478 - -
Phac4g01991 898 ProSiteProfiles Myb-like domain profile. 426 478 IPR001005 -
Phac4g01991 898 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 535 580 IPR017930 -
Phac4g01991 898 CDD SANT 589 630 IPR001005 -
Phac4g01991 898 Gene3D - 588 634 - -
Phac4g01991 898 MobiDBLite consensus disorder prediction 819 834 - -
Phac4g01991 898 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 15 832 - -
Phac4g01991 898 ProSiteProfiles Myb-like domain profile. 581 631 IPR001005 -
Phac4g01991 898 MobiDBLite consensus disorder prediction 819 839 - -
Phac4g01991 898 CDD SANT 486 530 IPR001005 -
Phac4g01991 898 MobiDBLite consensus disorder prediction 734 753 - -
Phac4g01991 898 CDD SANT 433 478 IPR001005 -
Phac4g01991 898 CDD SANT 537 580 IPR001005 -
Phac4g01991 898 Pfam Myb-like DNA-binding domain 535 578 IPR001005 -
Phac4g01991 898 Pfam Myb-like DNA-binding domain 588 629 IPR001005 -
Phac4g01991 898 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 426 478 IPR017930 -
Phac4g01991 898 Pfam Myb-like DNA-binding domain 434 495 - -
Phac4g01991 898 ProSiteProfiles Myb-like domain profile. 534 580 IPR001005 -
Phac4g01991 898 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01991 Phac-Chr4 46594911 46604126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01991 206 682 MYB-Related Transcription Factor Family AT3G18100 50.816 1.08e-166 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac4g01991 Myb_DNA-bind_6 2.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01991 K09422 - gmx:778073 1306.97