Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01989 ATGACTCCTCGCGTCGGCGATTTCGAAAACGACAATCTGTCCTCCACCGACGACGATGACGACGACGGCTTCAAGGAAGATATGGCCGCGCTCTCCCGAGCCTGCATGATCGTTGTCCCAGGCGCCGATGATTATTCCGCAGCTGAAGACGATGTTCCGCCGATGGTCCCTCTCACTGATGACGCCGGCACTGCTATTGTTCCCGTGGCCACCGATTCCGACTCCGACGACCAGGACGACCTCGAATGTCTCAAGAGAGTGCAGAGCCTTTACCAGCCTCTGTCCGTTCTTCCGCCGCTTGAGCCGGCGGTGGCCGTGTCTGACGATGACGATGACGTGGATGATCTCGAGACCGTGCGCGCCATCATGAAAAGGTTTGGCGACTACAACGAAGGTTTGCATGAAGGTGGAATAAATAAGTTGGTTGAGGAGGATCAGATTTCCAGCCTGGGCTGTGAGGGTGACATTGCTAATGGCTCAATCCATTACGAATCAGATGGTGGTGAATTATGTCCTATTTCTCAAGATCCTAACGAGGCTGCCACAGAGGAATTGATTGAAAACATTGAGATGCAGCTTAGTGATTTTGTTGAGAGTTCTGAACCGGATGCCTGGGAGTTGACCACATTACCACAGAAAAAAATGAGCTGTCCTCCTGTTGTTCAGTGTTTTATTGATGCCATTAAAAAAAATAGGGATTTGCAGAGATTTCTTAGAGGCAAATTGATTGAGCTTGAGGCTAAAATTGAGGAAAGCAAAAAGATAAGGAATAAAATTAAAATTCTGAAGGACTTCCAGGCTTCCTGCACTAGAAGAACAGGGAATATATTATCACTGAAAAAAGATCCACGTGTTCAATTAATATCTGCAAAAAGGTCTTCTGCTCGGAAGAAGTCTAAGAAACATAAAAAGGTACCTGCAATGTGTTATGGCCCAGAAGAAAATTCTCGTGTTGCTAACTATAGGATGGTATTGGAAAGATTTCCACTTTCGTTGGATCGGAAAAAATGGTCTATGGTAGACAGGGGAAATCTTTTTAAGGGAATTAAGCAACAATTCCAAGAAATGGTACTTCAACTTTCACTTTCACTTGATAGAACAAGTTCTGAGGGCTTGCTTGGAGATGCTGATGACATGGATAATATAATTGCATCTGTTAAAGATCTTGAAGTCACACCAGAGAGGATTAGAAAATTTTTGCCTAAAGTTAATTGGGATCTGATGGCTTCTATATATGTTGGTGGCCATACTGGTGCTGAATGTGAATCAAGGTGGTTGAATTATGAAGATCCTTTGATCAACCAAGGTGCATGGACTAAGGAAGAGGACAGGTCCCTTTTACTTATTGTCCAAGATATGGGCATCAGGAACTGGTTCAATATTGCTTCATCATTGGGCACAAGCAGGACTCCATTTCAATGTTTGTCACGATTCCAAAGGAGTTTAAATCCTTCAATGCTAAATAGTGAATGGACTGAGGAAGAGGATGCTCAACTATGTTCTGCTGTGACATATTTTGGTGATGGCAATTGGCAGTGTGTGGCTTCTGTTTTAGAACGGCGAACAGGAACCCAGTGCTCAAATAGATGGAAGAAATCCCTTTGTCCTGAGAAGAAAGGGAGCTTTACACCAGAGGAAGATATACGCTTAACAGTAGCTGCTATGCTTTTTGGGCGGAAATGGAATCAAATAGCTAAATATGTTCCTGGCCGGATCCAATCTCAGTGTAGGGACAGATACCTCAATAGTCTGGATCCTTCTTTGAAATGGGGTGGATGGACTGAGAAAGAGGATTTAAGATTAGAAGCTGCAATTGCCAAGCATGGATATTGTTGGTCTAAGATTGCTGAAGAAGTGCCTCCCCGAACGGATTCTCAATGCCGAAAGAGATGGAAAGTGTTATACCCTGAACAAGTTCCTTTGCTTCAAGAAGCAAGAAAGAAGCAAAGGGCTATTATTGGTGGTAACTTTGTTGATCGAAAATCTGAACGTCCAACCATTACACTTAATGACTTTCTACCTTTACTTGCATTAGCTCCAAAATCTGATGTTGGTGCTTCAGACATCTGCAAGAAGCGCAAGACCAGCAATGTTCCCAAGAAAACGAGCTCTAAGAAAGGTGCAAAGAGAACTCAACGTACCAAAGAAGTACGAGATACAGAGGTATATCATGATGATGAGCTCTACCCAGTCTCTACATGCAGCAATCTTCCCAAAAAGAAGATGGGGTCCAAAAGACGTATAAAAAGTAGTCGAAATCCTCCCCAAGAATTAGTGGATATCTCTTGTAGTGACAAGGTCACTTACATTGAGGGTTCAGAAAACCAATCTACCTATATTCCGAATTCTGAAAATCAAGATTCAGACAACATACCCCTTGCATGTTTTTTACGCAAGAAATCAAATGAGATATTATCTAGATTTAACAAAAAATTAAGTCAAACTTCCTTCTCTAGGATTACTGATGTTCCTGAGCAGGTTGAAAGTCAAAGCGCATCTGATGATCAAGGCGGCTTGCCTCATTCTTGTGAAACTGTTGGAACTAAAAAATTGCTTGTGCAGCCGAATGTTGCTTCTGATAGACGAGTGAGAAGCCAAGAGGATACAAATACTTTGACATGTGATGATGACGACGATGACCATATGACCCTTGCATGCTTTCTAAAAAACAAGCCAAAGAAAGAGGTCAACCTGCTAAAGGACATGTGA 2709 0.4282 MTPRVGDFENDNLSSTDDDDDDGFKEDMAALSRACMIVVPGADDYSAAEDDVPPMVPLTDDAGTAIVPVATDSDSDDQDDLECLKRVQSLYQPLSVLPPLEPAVAVSDDDDDVDDLETVRAIMKRFGDYNEGLHEGGINKLVEEDQISSLGCEGDIANGSIHYESDGGELCPISQDPNEAATEELIENIEMQLSDFVESSEPDAWELTTLPQKKMSCPPVVQCFIDAIKKNRDLQRFLRGKLIELEAKIEESKKIRNKIKILKDFQASCTRRTGNILSLKKDPRVQLISAKRSSARKKSKKHKKVPAMCYGPEENSRVANYRMVLERFPLSLDRKKWSMVDRGNLFKGIKQQFQEMVLQLSLSLDRTSSEGLLGDADDMDNIIASVKDLEVTPERIRKFLPKVNWDLMASIYVGGHTGAECESRWLNYEDPLINQGAWTKEEDRSLLLIVQDMGIRNWFNIASSLGTSRTPFQCLSRFQRSLNPSMLNSEWTEEEDAQLCSAVTYFGDGNWQCVASVLERRTGTQCSNRWKKSLCPEKKGSFTPEEDIRLTVAAMLFGRKWNQIAKYVPGRIQSQCRDRYLNSLDPSLKWGGWTEKEDLRLEAAIAKHGYCWSKIAEEVPPRTDSQCRKRWKVLYPEQVPLLQEARKKQRAIIGGNFVDRKSERPTITLNDFLPLLALAPKSDVGASDICKKRKTSNVPKKTSSKKGAKRTQRTKEVRDTEVYHDDELYPVSTCSNLPKKKMGSKRRIKSSRNPPQELVDISCSDKVTYIEGSENQSTYIPNSENQDSDNIPLACFLRKKSNEILSRFNKKLSQTSFSRITDVPEQVESQSASDDQGGLPHSCETVGTKKLLVQPNVASDRRVRSQEDTNTLTCDDDDDDHMTLACFLKNKPKKEVNLLKDM* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01989 902 CDD SANT 593 634 IPR001005 -
Phac4g01989 902 Gene3D - 432 482 - -
Phac4g01989 902 Pfam Myb-like DNA-binding domain 592 633 IPR001005 -
Phac4g01989 902 Pfam Myb-like DNA-binding domain 539 582 IPR001005 -
Phac4g01989 902 MobiDBLite consensus disorder prediction 823 838 - -
Phac4g01989 902 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 585 639 IPR017930 -
Phac4g01989 902 MobiDBLite consensus disorder prediction 823 843 - -
Phac4g01989 902 Gene3D - 538 590 - -
Phac4g01989 902 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 539 584 IPR017930 -
Phac4g01989 902 CDD SANT 541 584 IPR001005 -
Phac4g01989 902 CDD SANT 490 534 IPR001005 -
Phac4g01989 902 SUPERFAMILY Homeodomain-like 412 479 IPR009057 -
Phac4g01989 902 MobiDBLite consensus disorder prediction 738 757 - -
Phac4g01989 902 SUPERFAMILY Homeodomain-like 486 580 IPR009057 -
Phac4g01989 902 CDD SANT 437 482 IPR001005 -
Phac4g01989 902 Gene3D - 592 638 - -
Phac4g01989 902 ProSiteProfiles Myb-like domain profile. 538 584 IPR001005 -
Phac4g01989 902 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 430 482 IPR017930 -
Phac4g01989 902 ProSiteProfiles Myb-like domain profile. 585 635 IPR001005 -
Phac4g01989 902 Pfam Myb-like DNA-binding domain 438 499 - -
Phac4g01989 902 MobiDBLite consensus disorder prediction 690 717 - -
Phac4g01989 902 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 483 538 IPR017930 -
Phac4g01989 902 SUPERFAMILY Homeodomain-like 564 636 IPR009057 -
Phac4g01989 902 Gene3D - 489 537 - -
Phac4g01989 902 ProSiteProfiles Myb-like domain profile. 430 482 IPR001005 -
Phac4g01989 902 ProSiteProfiles Myb-like domain profile. 483 534 IPR001005 -
Phac4g01989 902 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 15 836 - -
Phac4g01989 902 SMART sant 487 536 IPR001005 -
Phac4g01989 902 SMART sant 434 484 IPR001005 -
Phac4g01989 902 SMART sant 333 431 IPR001005 -
Phac4g01989 902 SMART sant 589 637 IPR001005 -
Phac4g01989 902 SMART sant 538 586 IPR001005 -
Phac4g01989 902 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01989 Phac-Chr4 46594911 46604126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01989 210 686 MYB-Related Transcription Factor Family AT3G18100 50.816 1.29e-166 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac4g01989 Myb_DNA-bind_6 2.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01989 K09422 - gmx:778073 1318.91