Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01980 ATGAAAGTTGTTGTTAGGTTTACACCAAAAAAGTTGTTAGAATATATCAAGATTCAAGAGAAGGATCAATTTTGGGTTCTAGCTGATAGTTTGGGCATCCCATGTCGGTTGGTGAAGGGGCTGCAATATACAAGTTCCGACAACGTGGCTATAAACTTTGTCAAGATTGATGATGGAAGGGAATACATTGTTGATCTAATGGCAGATCCTGGAACACTTATTCCATCTGATGCAACTGGATCACAGATAGAGTGCGATGAATCTTCCTATGTGGCCAGTCCTTCATCTAGAGACCCTGATTCCTCACATGTAGCATCATCCAGCAGTGGTGTTGGAAGTTCATACGAAGAAACTTTGGATATGGGGATGTTGGACAAAGGAAACAGATCAAAACATATAGGTAAAGGATCTGATGTAAGCGTGCCCTCTACGGGAAAGGAAGAATCAATAAGACCCTTGTTTGAATTTAAAAGCCCTCACAATGTTGAGAAGATCGCGGAGCAGGAAGCTCCTGGCAGGCCTAATCATCCACATGTACATGCAAGATCTCCATCTTGGACTGAAGGGATCAGTTCTCCTGCAGTACGTAGGATGAAAGTCAAAGATGTTTCTCTATACATGATTGATGCTGCAAAGGAGAACCCTCACTTAGCCCAGAGACTTCATGACGTTTTACTTGAAAGTGGTGTGGTTGCTCCTCCAAATCTATTTTCTGAAATTTATGATGATGACTCAGGTTCCTCAACTGAGGCCTACTTTCCAACAGAAGAAAAAGATGAACCTAAGCAGGGAAGTGGGCAGAAAGAAGCTGAGCTTGATGGTAATCTTTGTCATGCTCGAATTTTGCCTCCTTTGGCTCACAATAGAGTCCAGAACAAAGCAAGTTCTAGTGATCAGGTAGAGCATTCTAAACCTGTAGAAGGTTTAGGAATCAACCTTCCTCATTATACAAGGGAACCAGCTGTACAGCATATACCACCTCAGGTAAAATATGGTCAAAATGTTGCTGCTGCTGCAGCTGCCGCCGCTGCCGTTGTTGCATCTTCTATGGTAGTTGCGGTGGCAAGATCTAGCATTGACTCAAACATAGATCTTCCAGTAGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACAACTGCTGCTGTCAGTAAACAGTATGAACAAGGCAGTCGAAGCGATGGAGATACAGACAGTGCTGGTTATGACCTGAAGGGTAGTGGTGATGGAGAACATATAGCTTTAGGAGCAAATTCAGAAGGTGACCGGAGATCTGATAGATCAGTATTAAGTAATGATAGCACAAAATCTGACTCTGCATTAGATGATCAGGATGTTGCCGAGGTTGACATTCCGTGGGAGGAAATCTCCCTCGGTGAGCGTATCGGACTTGGATCATATGGGGAGGTGTATCGTGGTGAATGGCGTGGAACTGAAGTTGCTGTAAAGAGATTTCTAGATCAAGATATATCTGGTGAATCACTTGAAGAGTTCAAAACTGAAGTCAAAATAATGAAAAGATTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTAACTCGACCTCAAAATCTTTCAATTGTTACCGAATTTCTTCCCAGAGGAAGTTTGTATAGATTGCTTCATAGACAAAACAATCAATTAGATGAGCGAAGGCGTTTGAAGATGGCTATTGATGCTGCTCGAGGTATGAACTATTTGCACAACTGCACTCCAGTGATAGTGCATCGGGATTTGAAGTCCCCAAATCTTCTCGTTGACAAAAATTGGGTTGTGAAGGTATGTGATTTTGGCTTATCACGAATGAAGCATAGCACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCCGAGGTGTTGAGAAATGAACCTTCAAATGAGAAGTGTGATGTATATAGCTTTGGGGTCATATTATGGGAGCTCTCTACTTTGCAGCAACCCTGGGGTGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAGCATCGCCGTCTTGACATTCCTGATGATGTTGACCCTACCATAGCAGATATTATCAGGAAATGCTGGCAAACAGATCCAAAGTTGAGACCTACATTTGTGGAAATATTGGCGGCTCTGAAGCCATTACAGAAGACAATTTTTAGCTCTCAAGTGCCTCGACCAAGTGCATCGGGGAAGCATGAGAAGGGTCAGTCATCGCGTGTTGTAGAAGACCCAGCAAGATAG 2238 0.4348 MKVVVRFTPKKLLEYIKIQEKDQFWVLADSLGIPCRLVKGLQYTSSDNVAINFVKIDDGREYIVDLMADPGTLIPSDATGSQIECDESSYVASPSSRDPDSSHVASSSSGVGSSYEETLDMGMLDKGNRSKHIGKGSDVSVPSTGKEESIRPLFEFKSPHNVEKIAEQEAPGRPNHPHVHARSPSWTEGISSPAVRRMKVKDVSLYMIDAAKENPHLAQRLHDVLLESGVVAPPNLFSEIYDDDSGSSTEAYFPTEEKDEPKQGSGQKEAELDGNLCHARILPPLAHNRVQNKASSSDQVEHSKPVEGLGINLPHYTREPAVQHIPPQVKYGQNVAAAAAAAAAVVASSMVVAVARSSIDSNIDLPVAAAATATAAAVVATTAAVSKQYEQGSRSDGDTDSAGYDLKGSGDGEHIALGANSEGDRRSDRSVLSNDSTKSDSALDDQDVAEVDIPWEEISLGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFKTEVKIMKRLRHPNVVLFMGAVTRPQNLSIVTEFLPRGSLYRLLHRQNNQLDERRRLKMAIDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPTIADIIRKCWQTDPKLRPTFVEILAALKPLQKTIFSSQVPRPSASGKHEKGQSSRVVEDPAR* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01980 745 CDD STKc_MAP3K-like 464 710 - -
Phac4g01980 745 MobiDBLite consensus disorder prediction 387 445 - -
Phac4g01980 745 FunFam Serine/threonine-protein kinase CTR1 537 720 - -
Phac4g01980 745 FunFam Serine/threonine-protein kinase isoform 1 449 536 - -
Phac4g01980 745 Gene3D Phosphorylase Kinase; domain 1 451 535 - -
Phac4g01980 745 SMART serkin_6 458 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01980 745 Pfam Ethylene-responsive protein kinase Le-CTR1 24 74 - -
Phac4g01980 745 MobiDBLite consensus disorder prediction 720 745 - -
Phac4g01980 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Phac4g01980 745 ProSiteProfiles Protein kinase domain profile. 458 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01980 745 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 122 715 - -
Phac4g01980 745 MobiDBLite consensus disorder prediction 87 115 - -
Phac4g01980 745 ProSitePatterns Protein kinases ATP-binding region signature. 464 485 IPR017441 GO:0005524
Phac4g01980 745 MobiDBLite consensus disorder prediction 418 433 - -
Phac4g01980 745 Pfam Protein tyrosine and serine/threonine kinase 459 709 IPR001245 GO:0004672|GO:0006468
Phac4g01980 745 MobiDBLite consensus disorder prediction 169 188 - -
Phac4g01980 745 PRINTS Tyrosine kinase catalytic domain signature 681 703 IPR001245 GO:0004672|GO:0006468
Phac4g01980 745 PRINTS Tyrosine kinase catalytic domain signature 637 659 IPR001245 GO:0004672|GO:0006468
Phac4g01980 745 PRINTS Tyrosine kinase catalytic domain signature 532 545 IPR001245 GO:0004672|GO:0006468
Phac4g01980 745 PRINTS Tyrosine kinase catalytic domain signature 571 589 IPR001245 GO:0004672|GO:0006468
Phac4g01980 745 PRINTS Tyrosine kinase catalytic domain signature 618 628 IPR001245 GO:0004672|GO:0006468
Phac4g01980 745 Gene3D Transferase(Phosphotransferase) domain 1 537 721 - -
Phac4g01980 745 SUPERFAMILY Protein kinase-like (PK-like) 444 709 IPR011009 -
Phac4g01980 745 MobiDBLite consensus disorder prediction 87 146 - -
Phac4g01980 745 MobiDBLite consensus disorder prediction 253 267 - -
Phac4g01980 745 MobiDBLite consensus disorder prediction 241 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01980 Phac-Chr4 46477809 46486123 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01980 24 728 MAP Kinase Kinase Kinase AT1G73660 62.517 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phac4g01980 PK_Tyr_Ser-Thr 4.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01980 - - vra:106769971 1271.53