Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01972 ATGGAGGAAGTGGATTCAATACCAAAGTCTCTGATGGAAAATCTCCTTGGCCTTTTGAGGGTTCGCGTGAAGCGTGGTATCAACCTTGCCGTTCGTGATGTCCGAAGCAGCGACCCTTATGTTGTCATCAAGATGTTCAATCAGAAACTAAAGACCCGTTTCATTAGAAAGGATGTGAATCCTGAGTGGAATGAAGACCTTACGCTTTCTATTATAGATCCGAATCATCAAGTTAAACTGATCGTGTATGACCATGACACCTTTAGCAAAGATGACAGAATGGGAGATGCAGAATTTGACATCTTTCCCTTTATAGAAGCCTTGAAGAGCAACATAACTGGCCTTCCAAATGGTACTGTAATCAAAAGAACACAACCAAGCGCGGAGAACTTCCTGGCTGATGAGAGCTGCATCACTTGTGTCAATGGCAAGCTTGTCCAAGATATGATCCTTAGATTGCAAAATGTGGAATGTGGTGAAGTGGAAATTCAATTGCAGTGGATTGATCTTCCTGGTTCTAAGGGTATATGA 531 0.4237 MEEVDSIPKSLMENLLGLLRVRVKRGINLAVRDVRSSDPYVVIKMFNQKLKTRFIRKDVNPEWNEDLTLSIIDPNHQVKLIVYDHDTFSKDDRMGDAEFDIFPFIEALKSNITGLPNGTVIKRTQPSAENFLADESCITCVNGKLVQDMILRLQNVECGEVEIQLQWIDLPGSKGI* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01972 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 102 IPR035892 -
Phac4g01972 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 14 174 IPR044562 -
Phac4g01972 176 ProSiteProfiles C2 domain profile. 1 117 IPR000008 -
Phac4g01972 176 Gene3D C2 domain 13 174 IPR035892 -
Phac4g01972 176 CDD C2_ArfGAP 16 159 - -
Phac4g01972 176 Pfam C2 domain 17 101 IPR000008 -
Phac4g01972 176 SMART C2_3c 18 113 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01972 Phac-Chr4 46416299 46419217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01972 49 176 C2H2 Transcription Factor Family AT1G70790 57.692 7.59e-48 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01972 - - gmx:100810504 310.457