Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01965 ATGGAGAGGGAATTCTTTGGCTTGGGTTCCAAAAATGGTGCATGGACTACCATGAAAGATGATGCTGCTAACAAACCAAAAGACCCAGTGAGGAGTTCAGGAATGCGGTGCTCATTCCCAAACAAGGTTTCAGTCCTTCCTCAGTTCATGTCCTTCAAGACCAATCAGGAAGACAGACCTAGAAAGAATATTTTTGATCCACTAGCTTCATCTGGATATATGAACATGCCAACTAAAGAGGCTTTTGAGTCTAACCAGAAACCATTTTTGGGTGTGGCCCAGAGAACTTTGTCCATAGGCAAGCATAGTGCTGGAAACAAACAGGGAATGGTAGTTTATCCCATGCAATGCTGTGATGCACAATCTGCATGCCTTCAGGAAGCAAGAACATTTTCAGTTTCCAACCAATCAAATCAAGTGAGTCCTGTTCTTCAATCTAATCTTGCTACAGCCGGATTGAACATGGTCAATTCAGGCATAAAACCACAACCTCTTGGTTCCAAATCCTCTGGCACACCTCTATCTGTTCTTCCATCAATAGGTTCCATTGTTGGATCCACTGACTTAAGGAATAGTTCCAATTCCTCGGCAATGGCTTCTCAGCTCACCATTTTCTATGCTGGTTCCGTATGTGTTTATAATGACATAACTCCTGAGAAGGCCAAGTCTATCATGTCAATGGCTGGAAATGGCTCTACTCCAACTCAGACAATGGCAGTTTCCACAGCTAAACTTCAGACATCAGTTTCTATTCCATTGAAAGATGATGGTTTCATTATGAGCCAGTCCTATCCTCCTTCACCCCTCCCAAGCCCTCTCTCACTGACATCTGATGTCAATTCTCAGCCAGGAGGAGGATCTTCTAGCAACAATAATCTTGCAATAATAAGACCAGTAGTAGGACCTTCAACTGCCCCTACTAACCATTTGGAGTCACCTATTATTGTTGGTTCTGTAGGATCTGCATCTAAGGAAAATGCTCAACCAGGTATACTATGCCTAGTCTCTCCAGTATACTTGCCTCAGGCACGCAAAGCATCCTTAACTCGGTTTTTGGAGAAGAGAAAGGAAAGGATGATGAGCACATCACCATACTTTTACATGAGCAAGAAATCATCTGAATGCAGCTCATCTGGATCAGACAGTGTTAGTTTCTCCTTTAACATCTCTGGATCCTGTTCTCTTCCAGCCACCAACTAG 1200 0.4325 MEREFFGLGSKNGAWTTMKDDAANKPKDPVRSSGMRCSFPNKVSVLPQFMSFKTNQEDRPRKNIFDPLASSGYMNMPTKEAFESNQKPFLGVAQRTLSIGKHSAGNKQGMVVYPMQCCDAQSACLQEARTFSVSNQSNQVSPVLQSNLATAGLNMVNSGIKPQPLGSKSSGTPLSVLPSIGSIVGSTDLRNSSNSSAMASQLTIFYAGSVCVYNDITPEKAKSIMSMAGNGSTPTQTMAVSTAKLQTSVSIPLKDDGFIMSQSYPPSPLPSPLSLTSDVNSQPGGGSSSNNNLAIIRPVVGPSTAPTNHLESPIIVGSVGSASKENAQPGILCLVSPVYLPQARKASLTRFLEKRKERMMSTSPYFYMSKKSSECSSSGSDSVSFSFNISGSCSLPATN* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01965 399 SMART tify_2 195 230 IPR010399 -
Phac4g01965 399 ProSiteProfiles Tify domain profile. 195 230 IPR010399 -
Phac4g01965 399 MobiDBLite consensus disorder prediction 273 291 - -
Phac4g01965 399 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 132 376 IPR040390 -
Phac4g01965 399 Pfam tify domain 199 229 IPR010399 -
Phac4g01965 399 MobiDBLite consensus disorder prediction 269 291 - -
Phac4g01965 399 MobiDBLite consensus disorder prediction 16 36 - -
Phac4g01965 399 Pfam Jas motif 341 365 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01965 Phac-Chr4 46340072 46345975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01965 35 383 Tify Gene Family AT3G17860 37.183 4.88e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac4g01965 tify 6.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01965 K13464 - gmx:100807288 540.036