Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01964 ATGCGGTGCTCATTCCCAAACAAGGTTTCAGTCCTTCCTCAGTTCATGTCCTTCAAGACCAATCAGGAAGACAGACCTAGAAAGAATATTTTTGATCCACTAGCTTCATCTGGATATATGAACATGCCAACTAAAGAGGCTTTTGAGTCTAACCAGAAACCATTTTTGGGTGTGGCCCAGAGAACTTTGTCCATAGGCAAGCATAGTGCTGGAAACAAACAGGGAATGGTAGTTTATCCCATGCAATGCTGTGATGCACAATCTGCATGCCTTCAGGAAGCAAGAACATTTTCAGTTTCCAACCAATCAAATCAAGTGAGTCCTGTTCTTCAATCTAATCTTGCTACAGCCGGATTGAACATGGTCAATTCAGGCATAAAACCACAACCTCTTGGTTCCAAATCCTCTGGCACACCTCTATCTGTTCTTCCATCAATAGGTTCCATTGTTGGATCCACTGACTTAAGGAATAGTTCCAATTCCTCGGCAATGGCTTCTCAGCTCACCATTTTCTATGCTGGTTCCGTATGTGTTTATAATGACATAACTCCTGAGAAGGCCAAGTCTATCATGTCAATGGCTGGAAATGGCTCTACTCCAACTCAGACAATGGCAGTTTCCACAGCTAAACTTCAGACATCAGTTTCTATTCCATTGAAAGATGATGGTTTCATTATGAGCCAGTCCTATCCTCCTTCACCCCTCCCAAGCCCTCTCTCACTGACATCTGATGTCAATTCTCAGCCAGGAGGAGGATCTTCTAGCAACAATAATCTTGCAATAATAAGACCAGTAGTAGGACCTTCAACTGCCCCTACTAACCATTTGGAGTCACCTATTATTGTTGGTTCTGTAGGATCTGCATCTAAGGAAAATGCTCAACCAGGTATACTATGCCTAGTCTCTCCAGTATACTTGCCTCAGGCACGCAAAGCATCCTTAACTCGGTTTTTGGAGAAGAGAAAGGAAAGGATGATGAGCACATCACCATACTTTTACATGAGCAAGAAATCATCTGAATGCAGCTCATCTGGATCAGACAGTGTTAGTTTCTCCTTTAACATCTCTGGATCCTGTTCTCTTCCAGCCACCAACTAG 1098 0.4308 MRCSFPNKVSVLPQFMSFKTNQEDRPRKNIFDPLASSGYMNMPTKEAFESNQKPFLGVAQRTLSIGKHSAGNKQGMVVYPMQCCDAQSACLQEARTFSVSNQSNQVSPVLQSNLATAGLNMVNSGIKPQPLGSKSSGTPLSVLPSIGSIVGSTDLRNSSNSSAMASQLTIFYAGSVCVYNDITPEKAKSIMSMAGNGSTPTQTMAVSTAKLQTSVSIPLKDDGFIMSQSYPPSPLPSPLSLTSDVNSQPGGGSSSNNNLAIIRPVVGPSTAPTNHLESPIIVGSVGSASKENAQPGILCLVSPVYLPQARKASLTRFLEKRKERMMSTSPYFYMSKKSSECSSSGSDSVSFSFNISGSCSLPATN* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01964 365 MobiDBLite consensus disorder prediction 239 257 - -
Phac4g01964 365 MobiDBLite consensus disorder prediction 235 257 - -
Phac4g01964 365 Pfam tify domain 165 195 IPR010399 -
Phac4g01964 365 ProSiteProfiles Tify domain profile. 161 196 IPR010399 -
Phac4g01964 365 SMART tify_2 161 196 IPR010399 -
Phac4g01964 365 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 98 342 IPR040390 -
Phac4g01964 365 Pfam Jas motif 307 331 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01964 Phac-Chr4 46340072 46345975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01964 1 349 Tify Gene Family AT3G17860 37.183 2.06e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac4g01964 tify 5.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01964 K13464 - gmx:100807288 480.715