Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01943 ATGGTCTTCAAGGGAAGGTTCTTCTCTTCCAAGAAATCCGATTCCTCCAGCCCCGATGCGTCATCCAACAGTCCTCGATCTTTCTCATCCAATTCCCCTTCCAGATCCGACAAGAAGAAGGCTAAATCCGCCGCTCATCCAACTCTAGCAGCCGGAGGCAGCGGTGGCGGAGCTCTTGCTGCGTGTCGTCAGACGCAGGTGAAGGACGGGACCAAAAAGAAGGATGCGGTCAAGGGGAAGGAAAGTCAAACTCCGCCGCCGGAGGCTAGTAAGGAATCTCCGGTGAAGAAGTTGACGGCGCTGGAAGGACGGGAATCGTCGGCGTCGGTGTCGCCGATTCTCGCGTCGTCGCTGGGGCTGAACAGGATCAAGACGAGATCGGGGCCGCTGCCGCAGGAGAGCTTCTTCGGGTTCAGGGGCGAGAAGGGAACGACGGCGCTCGGCGGCAGCAACCTCTCCCGGCCCGGCGTCGGCGTGCGCGGCGGCGATGGGAAGAAGAAGGAGGCGGCGAGCCAGAACAGGGTCGGGTTTCGTGAGGGTTCCCGTGGCGGTGCCCCTGCTGCCGGAGGTTGGGGCGATAACCGGAACAATTCTGACAGCGTGTCGACCTCGGGGAGCATGCCGTCTAGGGAGCAGAGTCCGGTGGTGTTGCCTCGGTCGCGGTTGCAGAACGGAGAGTCATCCTCGGAGGCCGCAGGCAACCAGGCATCATCATGGGCTCAGTCTGGCGGCTTAAGAAGTGAAGATGTTTGTACTCCAGAGGCAGCATATGATTTTGAAAACCCAAAGGAGTCTGAATCTCCTCGTTTTCAAGCCATATTACGTGTCACCAGTGCACCTAGAAAGAGGTTTCCTTCAGATATCAAAAGTTTTTCCCATGAGTTGAATTCGAAAGGTGTCTGGCCTTTTCCATTTTTGAAGCCTCGACGGTTAAATAACCTTGAGGAGATTTTGGTTGTTATTAGGGCAAAATTCGATAAAGCAAAGGAAGACGTAAACTCTGATCTAGCCATTTTTGCGGCAGATCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAATGGCAAGAGACGATTGAGGACTTGCTAGTTTTGGCAAGGAGCTGTGCTATGACTTCATCTGGGGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGATCATCCTCCAGGGATGCTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTCACAAGGTGTACCCGATTATTGCAATTCCACAAGGAAAGTGGTCTGGCTGAGGATGAACCTGTTTTCAATCTCCGTCAATCAAGAGTCTTGCATTCAGCTGGAAAATGTATTCCTCCTAGTGTGGGAAGGGATTCTAAAAGTTCAAGTGCTGCAAAGACATTAAAGCCTTCATCAAAAAAAGCTTTTAGTCAAGAACAGAGTATGATGGGTTGGAAGAAAGATGTTATGCAACCCGAAAATCTTTTGCTTCCTGCTGATGACGACAATACAAAACACTTTGACTCTTCAGGCAGGGATCGAATGGCTTCTTGGAAGAAATTCCCATCTCCGTCAGGAAAAAGCCCTAAAGAAGCTGCTCAGTTGAAGGACCAAAATTATGGGAGAGTTGAATCTTCAAAGGCATCAAATAATAAGAGATTCCCTTCTGATGTGGATCTCTCTACTGCTAAGCCATCTGAGTTTCTTCCTATCAAAGATTCCTTGGATCATGCTTCCAAACACCAACACAAAGTTTCTTGGGGATACTGGGGAGATCAGCAGAATAATAGTGAGGAGAACTCGATAATTTGTCGTATATGTGAAGAGGAAGTTCCTACTTCACATGTTGAAGATCATTCAAGGATCTGTGCAGTTGCTGATAGATGTGATCAGAAGGGACTGAGTGTCAATGAGCGTCTTGTCAGAATTGCTGAAACACTAGAAAAGATGATGGAATCATGTTCACAAAAGGATTCCCAACAAATGGTGGGAAGTCCTGATGTTGCAAAAGTATCAAATTCTAGTATGACTGAAGAATCTGATGTTCCTTCTCCTAAACTTAGTGATTGGTCTCGCAGAGGCTCAGAGGACATGCTAGACTGTTTCCCTGAAACTGATAATTCTACTTTTATGGATGACCTAAAAGGATTACCACTTATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCAAGGTCACCATTGATGACACCACGAACAAGTCAGATTGACTTGCTCTTGGCAGGGAAGGGTGCTTATTCTGAACATGATGATCTGCTGCAGATGAATGAACTTGCTGATATAGCTCGATGTGTGGCAAATGCATCTCTGGATGATGATCGCACAACTTCATATTTATTATCTTGTCTTGATGACTTGCGGGTTGTTGTAGAACGAAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACACGTATTGAGAAGCTAATACGAGAGAAGTATCTGCAGCTCACTGAGATGGTGGATGTTGAAAAAATAGATACAGAGAGCACAGTAGATGATGATGTTCTTTTGGAAGATGATGTGGTTCGTAGCTTGAGAACAAGTCCAATCCATTCGTCAAGGGATCGAACCTCTATTGATGACTTTGAAATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAAAAAAGAACAACTGGTGATCTTTTTGCAATAAAGGTGCTTGCGTTAGAGTATTTGCATTCACTGCGTGTGGTTCATCGAGATTTGAAGCCTGACAATTTATTGATAGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCTAAAGTTGGTCTTATCAACAGCACAGATGATCTGTCTGGCCCAGCAGTGAATGGGACATCCCTACTTGAAGAAGACGAGACTGATGTATTGACATCTGAGGATCAATGGGAAAGGAGGAAGAAACGCTCTGCAGTGGGCACGCCTGATTACTTAGCCCCAGAGATACTTTTGGGAACTGGACATGCGTATACTGCCGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAACGCAGAGCATCCTCAGAATATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGCAGTTCCTGAAGAGATGAGTCCTGAAGCACAGGATCTTATTGATCGATTATTGACAGAAGATCCTAATCAAAGACTAGGATCAAAAGGCGCATCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTGCTTCTGAGAGCGCTCTAGATACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGCCTTGTATATCCAGCCAGTGATGTTGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGCGGGGGTCTTGCTGAGTTTGATTCTGGGGCATCTGTCAATTACTCTTTCAGTAATTTCTCCTTTAAGGGGAAAGGCAAAGCTAGGTAG 3591 0.4612 MVFKGRFFSSKKSDSSSPDASSNSPRSFSSNSPSRSDKKKAKSAAHPTLAAGGSGGGALAACRQTQVKDGTKKKDAVKGKESQTPPPEASKESPVKKLTALEGRESSASVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGTTALGGSNLSRPGVGVRGGDGKKKEAASQNRVGFREGSRGGAPAAGGWGDNRNNSDSVSTSGSMPSREQSPVVLPRSRLQNGESSSEAAGNQASSWAQSGGLRSEDVCTPEAAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFLKPRRLNNLEEILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSSGEFWLQCESIVQELDDRRQDHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAGKCIPPSVGRDSKSSSAAKTLKPSSKKAFSQEQSMMGWKKDVMQPENLLLPADDDNTKHFDSSGRDRMASWKKFPSPSGKSPKEAAQLKDQNYGRVESSKASNNKRFPSDVDLSTAKPSEFLPIKDSLDHASKHQHKVSWGYWGDQQNNSEENSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNERLVRIAETLEKMMESCSQKDSQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSEDMLDCFPETDNSTFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLLQMNELADIARCVANASLDDDRTTSYLLSCLDDLRVVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDTESTVDDDVLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLEEDETDVLTSEDQWERRKKRSAVGTPDYLAPEILLGTGHAYTADWWSVGVILFELLVGIPPFNAEHPQNIFDNILNRKIPWPAVPEEMSPEAQDLIDRLLTEDPNQRLGSKGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDVEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSGASVNYSFSNFSFKGKGKAR* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01943 1196 Gene3D Phosphorylase Kinase; domain 1 1113 1123 - -
Phac4g01943 1196 ProSiteProfiles Protein kinase domain profile. 754 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01943 1196 MobiDBLite consensus disorder prediction 652 683 - -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 1144 1161 - -
Phac4g01943 1196 Coils Coil 311 331 - -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 9 32 - -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 498 514 - -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 193 245 - -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 104 123 - -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 455 478 - -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 727 749 - -
Phac4g01943 1196 SUPERFAMILY Protein kinase-like (PK-like) 869 1132 IPR011009 -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 538 556 - -
Phac4g01943 1196 PANTHER SERINE/THREONINE-PROTEIN KINASE 620 914 - -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 448 481 - -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 1139 1164 - -
Phac4g01943 1196 Gene3D Phosphorylase Kinase; domain 1 880 914 - -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 1 247 - -
Phac4g01943 1196 ProSiteProfiles AGC-kinase C-terminal domain profile. 1095 1196 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phac4g01943 1196 MobiDBLite consensus disorder prediction 495 559 - -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 67 81 - -
Phac4g01943 1196 FunFam Serine/threonine protein kinase 15 985 1112 - -
Phac4g01943 1196 Pfam Protein kinase domain 914 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01943 1196 Gene3D Transferase(Phosphotransferase) domain 1 915 1112 - -
Phac4g01943 1196 MobiDBLite consensus disorder prediction 651 692 - -
Phac4g01943 1196 ProSitePatterns Serine/Threonine protein kinases active-site signature. 924 936 IPR008271 GO:0004672|GO:0006468
Phac4g01943 1196 CDD STKc_MAST_like 889 1099 - -
Phac4g01943 1196 SMART serkin_6 883 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01943 Phac-Chr4 46233787 46247384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01943 1 914 AGC Kinase Gene Family AT3G17850 60.574 0.0 996
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Phac4g01943 Pkinase 4.2e-38 CL0016