Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01941 ATGCAACATTCTCACACACTCTTTCTCACCATTCTCTTTCTCTTCTTCTTCTTCTTCTCTTCCACACTCTCCGACCTCTCGTCGGAGCGCGCGGCGCTCCTCGCCCTGCGCTCCGCCGTGCGCGGCCGCACGCTTCTCTGGAACACCACCTTCCCTTCGCCCTGCGCCTGGCCTGGCGTCCAATGCGACGATGCCAAAGCCACCGTGGTGGAGCTCCACCTCCCCGCCGTCGCTCTCTCCGGTGAGCTTCCCGCCGGTGTGTTCCCGGAGCTCCCCAACCTCCACACTCTCAGCCTCCGCGTCAACTCCCTCTCCGGCGCCCTCCCCGCCGACCTTGCCGCCTGCGCCGCCCTCCGCAACCTCTTCCTCCAACAGAACCACTTCTCCGGCGAGGTGCCGGCGTTTCTCTCCGGCATGACCGACCTCGTGCGGCTCAATTTGGCCTCCAACAACTTTTCCGGGCCAATTCCGGCGCGGTTCGGGAACCTCACCCGGTTGAGGACCCTTTTCCTTGAGAATAATCGGCTGACTGGTTCGTTACCCGGTTTGGAAGAACTCGGTGAATTGGCTCAGTTTAATGTCTCTTACAACATGTTAAATGGTTCTGTTCCTAAAAAGTTGCAGACTTTTGATAAAGATTCGTTTTTGGGCAATACCCTTTGTGGGAAGCCACTTGGGATTTGTCCCTGGGATGATGGGGGTGGTGAGAGTGGTGTAAATGGGAGTTCAAATTCAAGTGGGGTTGGAGGGGATGGAGGGAGTGTGATTGGAGGGGAAAAGAAGAAGGGGAAGCTTTCTGGGGGTGCAATTGCAGGGATTGTTGTGGGGTGTGTGGTGGCTCTTCTGTTTGTTGTGTTTGCTTTGATTCTTTTGTGTAGAAGTGGGAACAAGACTAGGAGTGTTGATAATGTTAGCAACATGGTGGGCTTGAAGGAGGAGCCTCAACAGCATGGAGAGATGGGAATTGAGGGCCGTAATGTGGAGAGTGGGGATGGGGGTGGGAATTCGGTGGCGGTGGCGGCAGTGGGTGGGAATGGAGTTGGTGGTGGAAGTGGTGGAGATAAGAAGTTGGTGTTTTATGGTAATAAGGTGAAGGTGTTTGATTTGGAGGATTTGCTAAGGGCTTCTGCTGAGGTGTTGGGAAAAGGAACTTTTGGGACTACCTATAAGGCTGTTTTAGAGGATGGGCCTGTGGTGGCTGTGAAGAGGTTGAGGGATGTGACGGTTTCGGAGAAGGAGTTTAAGGAGAAGATTGATGCGGTGGGAGTGATGGATCATCAGAATTTGGTGCCTCTCAGGGCTTACTATTATAGCAGGGATGAGAAACTTCTTGTTCATGATTACATGCCTATGGGAAGCCTATCTGCTATTTTGCATGGAAACAAAGGAGCTGGTAGGACACCGTTGAATTGGGAAATGAGATCAGACATTGCAATAGGAGCTGCTCGTGGCATCGAGTACCTACATTCACAAGGGCCTAGTGTTTCTCATGGAAACATAAAGTCCTCCAACATCCTCTTAACCAAATCCTATGATGCCAGGGTGTCTGATTTTGGCCTTGCACACCTTGTTGGCCCCTCATCCACACCCAACAGGGTGGCTGGCTACCGTGCCCCGGAAGTAACCGATCCACGCAAAGTTTCTCAGAAGGCTGATGTATACAGCTTTGGAGTGTTGCTCTTGGAACTTCTGACTGGAAAAGCTCCTACACATGCCCTCTTGAATGAGGAAGGAGTGGACCTTCCAAGATGGGTCCAATCAGTGGTTAGAGAGGAATGGAGTTCAGAGGTGTTTGATATTGAACTCCTTAGGTATCAGAATTCTGAAGAGGAAATGGTTCAGTTGTTGCAACTTGCAGTGGATTGTGTAGTTCCATACCCTGATAACCGACCTTCAATATCTCAAGTGAGACAACGCATAGAAGAGTTACGTAGGTCTAGCATGAAAGAGGGTACTCAAGACCAAATCCAACAACCTGATTTCATCGATGATATAGATGATGTATCCTCTAGATGA 2016 0.5124 MQHSHTLFLTILFLFFFFFSSTLSDLSSERAALLALRSAVRGRTLLWNTTFPSPCAWPGVQCDDAKATVVELHLPAVALSGELPAGVFPELPNLHTLSLRVNSLSGALPADLAACAALRNLFLQQNHFSGEVPAFLSGMTDLVRLNLASNNFSGPIPARFGNLTRLRTLFLENNRLTGSLPGLEELGELAQFNVSYNMLNGSVPKKLQTFDKDSFLGNTLCGKPLGICPWDDGGGESGVNGSSNSSGVGGDGGSVIGGEKKKGKLSGGAIAGIVVGCVVALLFVVFALILLCRSGNKTRSVDNVSNMVGLKEEPQQHGEMGIEGRNVESGDGGGNSVAVAAVGGNGVGGGSGGDKKLVFYGNKVKVFDLEDLLRASAEVLGKGTFGTTYKAVLEDGPVVAVKRLRDVTVSEKEFKEKIDAVGVMDHQNLVPLRAYYYSRDEKLLVHDYMPMGSLSAILHGNKGAGRTPLNWEMRSDIAIGAARGIEYLHSQGPSVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWSSEVFDIELLRYQNSEEEMVQLLQLAVDCVVPYPDNRPSISQVRQRIEELRRSSMKEGTQDQIQQPDFIDDIDDVSSR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01941 671 ProSiteProfiles Leucine-rich repeat profile. 165 187 IPR001611 GO:0005515
Phac4g01941 671 PANTHER OS05G0588300 PROTEIN 9 647 - -
Phac4g01941 671 CDD STKc_IRAK 380 643 - -
Phac4g01941 671 FunFam Probable inactive receptor kinase RLK902 26 183 - -
Phac4g01941 671 SUPERFAMILY Protein kinase-like (PK-like) 378 640 IPR011009 -
Phac4g01941 671 MobiDBLite consensus disorder prediction 644 671 - -
Phac4g01941 671 Pfam Protein kinase domain 377 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01941 671 Gene3D Ribonuclease Inhibitor 139 228 IPR032675 -
Phac4g01941 671 ProSiteProfiles Protein kinase domain profile. 374 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01941 671 Gene3D Phosphorylase Kinase; domain 1 353 448 - -
Phac4g01941 671 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Phac4g01941 671 SUPERFAMILY L domain-like 41 209 - -
Phac4g01941 671 FunFam Probable inactive receptor kinase At1g48480 449 651 - -
Phac4g01941 671 Gene3D Ribonuclease Inhibitor 28 138 IPR032675 -
Phac4g01941 671 ProSitePatterns Protein kinases ATP-binding region signature. 380 402 IPR017441 GO:0005524
Phac4g01941 671 Gene3D Transferase(Phosphotransferase) domain 1 449 668 - -
Phac4g01941 671 FunFam pollen receptor-like kinase 1 346 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01941 Phac-Chr4 46225830 46229375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01941 25 660 Receptor kinase-like Gene Family AT1G48480 59.380 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac4g01941 Pkinase 1.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01941 - - vum:124840126 1043.11