Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01921 ATGGCTCTCATTCGCCACCACCCTCGTTACCCTAACCTCCGTCTTCCCCTCTTAGACCTCTCCGAGCGCCGCTGCGGTTTCCCTCTCCCCGCCACCACCGTCAAATCTGTCAGTGACAACGCCATTAACATTGGTGACCTTGAGAAGCTTCTTATTCTTGGTCATGGTAATGGTGGCACTGTGTACAAAGTGTGCCATAAAGAAACTTCTGCAACCTATGCACTGAAGATTATCCGCAGCAATGTTCAGCGTGCACTTTCAGAAGTCTCAATCCTTCGTCGTGCCACTGACTGCCCCTATGTGGTTGGCTTCCATGGCTCTTTCCAAAAGTCCAATGACGAAAGGGATTGTGAAAATATCATTTCCCATGACGAAATCGCAATACTGATGGAGTACATGGACAATGGCAGCCTTGAAAGTGCCCTAGCCACCAATGGCACTTTCTCCGAAGAGAGACTTGTGGTGGTGGCGCGTGACATCCTCAATGGTCTCGCCTACCTCCATGCACGGAACATCATTCATCGCGACATTAAGCCTGCAAACATCCTCGTAAACACGAAAGGCGAGGTGAAGATTGGTGACTTCGGAGTTAGCAAAGTGGTGAGTGACACATTGGAGATGTGTAACTCTTATGTGGGCACAAACGCGTACATGAGTCCTGAACGGTTCAACCCAGATGCGTATGGAGGGAGCTACGATGGTTTTGCTGGTGATGTGTGGAGCTTTGGTTTGAGCCTCTTTGAACTCTATGTGGGTCACTTACCATTTCTCGAAGGTGGTGAAAGGCTCAACTGGGCCACCCTTGTGTGTGCCATCTGCTTCAGTGAGCCACCAAGCTTACCTGAGACTGCATCAATGGAGTTTCGGAACTTCATGGCGTGTTGCCTGAAGAAGGAGCCTAGTGAGAGGTGGACCACAACTCAACTCTTAACTCATCCATTTATATGCAAAGACCTAAAAAGCTCTTAG 969 0.4933 MALIRHHPRYPNLRLPLLDLSERRCGFPLPATTVKSVSDNAINIGDLEKLLILGHGNGGTVYKVCHKETSATYALKIIRSNVQRALSEVSILRRATDCPYVVGFHGSFQKSNDERDCENIISHDEIAILMEYMDNGSLESALATNGTFSEERLVVVARDILNGLAYLHARNIIHRDIKPANILVNTKGEVKIGDFGVSKVVSDTLEMCNSYVGTNAYMSPERFNPDAYGGSYDGFAGDVWSFGLSLFELYVGHLPFLEGGERLNWATLVCAICFSEPPSLPETASMEFRNFMACCLKKEPSERWTTTQLLTHPFICKDLKSS* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01921 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Phac4g01921 322 FunFam Mitogen-activated protein kinase 2 135 322 - -
Phac4g01921 322 PRINTS Tyrosine kinase catalytic domain signature 130 143 IPR001245 GO:0004672|GO:0006468
Phac4g01921 322 PRINTS Tyrosine kinase catalytic domain signature 284 306 IPR001245 GO:0004672|GO:0006468
Phac4g01921 322 PRINTS Tyrosine kinase catalytic domain signature 237 259 IPR001245 GO:0004672|GO:0006468
Phac4g01921 322 PRINTS Tyrosine kinase catalytic domain signature 166 184 IPR001245 GO:0004672|GO:0006468
Phac4g01921 322 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 43 317 - -
Phac4g01921 322 ProSitePatterns Protein kinases ATP-binding region signature. 53 76 IPR017441 GO:0005524
Phac4g01921 322 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Phac4g01921 322 Pfam Protein kinase domain 50 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01921 322 SMART serkin_6 47 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01921 322 CDD PKc_MAPKK_plant_like 46 315 - -
Phac4g01921 322 Gene3D Transferase(Phosphotransferase) domain 1 136 322 - -
Phac4g01921 322 SUPERFAMILY Protein kinase-like (PK-like) 44 317 IPR011009 -
Phac4g01921 322 ProSiteProfiles Protein kinase domain profile. 47 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01921 Phac-Chr4 46086265 46088107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01921 1 319 MAP Kinase Kinase Gene Family AT1G73500 53.231 7.75e-107 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Phac4g01921 Pkinase 2.3e-61 CL0016