Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01910 ATGTTAAATGGTAGAAGGACTCAACTTTCTTTTCCTGCAAAGGTCTTCATTTGCCAGGCAAAATCAGGCATAGATGGGTCATTGAATTTAAAAGTGGTGTCTCCCACTCTGTTAGTAGCAGAAAAGGAAGAAGCCAAGGCTGTATTGACCTTGTTCTTGAAGAAACAAGGTTCGAGCAATGCGGTTGCTGCTAGAACCATCAACAAGTCAGATCTTTTTATTGATCACCTTGTCTCAAAGCTTCATTCTAAACACAAGTCTTGGTATCTTGCAGGAAGAGAGCTTACAACTTTGGAGATCAGGGATGCTCTTATCCCTTATCTGGAATCTCTTTTTGAAGAGCATGGTGACACTCTGGTGGATATAGTGGAAAACTATCCAAATCCACCTGTTAAAGACAAATCAGAAGTGCTAGTTTCTCCTTCTAGTCCAGTGTTAGACTCTAAAAAGCTTAAAGCTGTGTCACTAGTGAGTGAGACAGACCCAGATGGTGGCAATCTGCGCCCTCATATTGTCTATCTCATAGAACTTGGTATGGATATCAAGCAGATTCGGAGTATCACACACCGATTCCCAGCTTTTGCCTACTATAGCTTGGAGGGTAAAATTAAGCCAGTGGTTGAGTTTTTTCTTGAACTTGGAGTGCCAAGAGAGCACATTCCCACTATCCTCAGTAAAAGGCCTCAATTATGTGGTATCAGTTTATCTGAAAATCTTAAACCCACCATGAGGTTCTTAGAATCATTGGGTGTTGATGAGAAGCAATGGCCAAAGCTGATCTATCGCTTCCCGGCCCTGCTAACTTATAGCCGGCAGAAAGTGATGGAAAGCATAGATTTCCTTCATGAATTGGGCCTCTCTGAAGAGAATATAGGGAAGATTTTAACTCGTTGCCCCAATATCGTTAGTTACAGTGTAGAGGACAATCTCCGACCCACAGCTAAGTACTTCCGTTCTTTGGGGGCTGATGTTGGCATTCTTCTATTCAGATGCCCACAGAATTTTGGTCTTAGCATTGAGGCCAACCTAAAACCTATAACAGCATTTTTCTTGGAGAGGGGATACACTTTGGAAGAAATTGGGACCATGATTTCAAGATATGGAGCCTTGTATACTTTCAGCTTGACTGAAAATTTGATTCCAAAATGGGATTTCTTTTTGACCACAGGATACCCAAAATCTGAGCTGGTTAAGTTCCCTCAGTATTTTGGATACAGTTTAGAGAAAAGGATTAAACCTAGATTTTCAATTATGGAGAAATCTGGAGTAAGGTTACTTCTGAATCAGGTTCTTTCTCTGTCAAGCAGCAACTTTGACAAGGCCTTGAAAAAGAAAATGAAAAAAATGCAAGATGGTTAG 1359 0.4091 MLNGRRTQLSFPAKVFICQAKSGIDGSLNLKVVSPTLLVAEKEEAKAVLTLFLKKQGSSNAVAARTINKSDLFIDHLVSKLHSKHKSWYLAGRELTTLEIRDALIPYLESLFEEHGDTLVDIVENYPNPPVKDKSEVLVSPSSPVLDSKKLKAVSLVSETDPDGGNLRPHIVYLIELGMDIKQIRSITHRFPAFAYYSLEGKIKPVVEFFLELGVPREHIPTILSKRPQLCGISLSENLKPTMRFLESLGVDEKQWPKLIYRFPALLTYSRQKVMESIDFLHELGLSEENIGKILTRCPNIVSYSVEDNLRPTAKYFRSLGADVGILLFRCPQNFGLSIEANLKPITAFFLERGYTLEEIGTMISRYGALYTFSLTENLIPKWDFFLTTGYPKSELVKFPQYFGYSLEKRIKPRFSIMEKSGVRLLLNQVLSLSSSNFDKALKKKMKKMQDG* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01910 452 Pfam mTERF 35 281 IPR003690 GO:0003690|GO:0006355
Phac4g01910 452 Pfam mTERF 171 344 IPR003690 GO:0003690|GO:0006355
Phac4g01910 452 Pfam mTERF 271 438 IPR003690 GO:0003690|GO:0006355
Phac4g01910 452 SMART mt_12 257 287 IPR003690 GO:0003690|GO:0006355
Phac4g01910 452 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Phac4g01910 452 SMART mt_12 221 252 IPR003690 GO:0003690|GO:0006355
Phac4g01910 452 SMART mt_12 325 356 IPR003690 GO:0003690|GO:0006355
Phac4g01910 452 SMART mt_12 393 424 IPR003690 GO:0003690|GO:0006355
Phac4g01910 452 SMART mt_12 185 216 IPR003690 GO:0003690|GO:0006355
Phac4g01910 452 SMART mt_12 361 392 IPR003690 GO:0003690|GO:0006355
Phac4g01910 452 FunFam Transcription termination factor MTERF5 chloroplastic 228 448 - -
Phac4g01910 452 PANTHER CGI-12 PROTEIN-RELATED 150 443 IPR003690 GO:0003690|GO:0006355
Phac4g01910 452 Gene3D Transcription termination factor 3, mitochondrial 230 448 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01910 Phac-Chr4 46010110 46013134 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac4g01910 mTERF 5.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01910 K15032 - gmx:100781900 769.615