Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01909 ATGAAGACTTTCTCCTTAATTCAACTACCCCACCATTTTTTTTGTGCAAGATTCTTCTCTTACACAACCACGAGCAGGACTCAACTTTCTTTTCCTGCAAAGGTCTTCATTTGCCAGGCAAAATCAGGCATAGATGGGTCATTGAATTTAAAAGTGGTGTCTCCCACTCTGTTAGTAGCAGAAAAGGAAGAAGCCAAGGCTGTATTGACCTTGTTCTTGAAGAAACAAGGTTCGAGCAATGCGGTTGCTGCTAGAACCATCAACAAGTCAGATCTTTTTATTGATCACCTTGTCTCAAAGCTTCATTCTAAACACAAGTCTTGGTATCTTGCAGGAAGAGAGCTTACAACTTTGGAGATCAGGGATGCTCTTATCCCTTATCTGGAATCTCTTTTTGAAGAGCATGGTGACACTCTGGTGGATATAGTGGAAAACTATCCAAATCCACCTGTTAAAGACAAATCAGAAGTGCTAGTTTCTCCTTCTAGTCCAGTGTTAGACTCTAAAAAGCTTAAAGCTGTGTCACTAGTGAGTGAGACAGACCCAGATGGTGGCAATCTGCGCCCTCATATTGTCTATCTCATAGAACTTGGTATGGATATCAAGCAGATTCGGAGTATCACACACCGATTCCCAGCTTTTGCCTACTATAGCTTGGAGGGTAAAATTAAGCCAGTGGTTGAGTTTTTTCTTGAACTTGGAGTGCCAAGAGAGCACATTCCCACTATCCTCAGTAAAAGGCCTCAATTATGTGGTATCAGTTTATCTGAAAATCTTAAACCCACCATGAGGTTCTTAGAATCATTGGGTGTTGATGAGAAGCAATGGCCAAAGCTGATCTATCGCTTCCCGGCCCTGCTAACTTATAGCCGGCAGAAAGTGATGGAAAGCATAGATTTCCTTCATGAATTGGGCCTCTCTGAAGAGAATATAGGGAAGATTTTAACTCGTTGCCCCAATATCGTTAGTTACAGTGTAGAGGACAATCTCCGACCCACAGCTAAGTACTTCCGTTCTTTGGGGGCTGATGTTGGCATTCTTCTATTCAGATGCCCACAGAATTTTGGTCTTAGCATTGAGGCCAACCTAAAACCTATAACAGCATTTTTCTTGGAGAGGGGATACACTTTGGAAGAAATTGGGACCATGATTTCAAGATATGGAGCCTTGTATACTTTCAGCTTGACTGAAAATTTGATTCCAAAATGGGATTTCTTTTTGACCACAGGATACCCAAAATCTGAGCTGGTTAAGTTCCCTCAGTATTTTGGATACAGTTTAGAGAAAAGGATTAAACCTAGATTTTCAATTATGGAGAAATCTGGAGTAAGGTTACTTCTGAATCAGGTTCTTTCTCTGTCAAGCAGCAACTTTGACAAGGCCTTGAAAAAGAAAATGAAAAAAATGCAAGATGGTTAG 1419 0.4094 MKTFSLIQLPHHFFCARFFSYTTTSRTQLSFPAKVFICQAKSGIDGSLNLKVVSPTLLVAEKEEAKAVLTLFLKKQGSSNAVAARTINKSDLFIDHLVSKLHSKHKSWYLAGRELTTLEIRDALIPYLESLFEEHGDTLVDIVENYPNPPVKDKSEVLVSPSSPVLDSKKLKAVSLVSETDPDGGNLRPHIVYLIELGMDIKQIRSITHRFPAFAYYSLEGKIKPVVEFFLELGVPREHIPTILSKRPQLCGISLSENLKPTMRFLESLGVDEKQWPKLIYRFPALLTYSRQKVMESIDFLHELGLSEENIGKILTRCPNIVSYSVEDNLRPTAKYFRSLGADVGILLFRCPQNFGLSIEANLKPITAFFLERGYTLEEIGTMISRYGALYTFSLTENLIPKWDFFLTTGYPKSELVKFPQYFGYSLEKRIKPRFSIMEKSGVRLLLNQVLSLSSSNFDKALKKKMKKMQDG* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01909 472 FunFam Transcription termination factor MTERF5 chloroplastic 248 468 - -
Phac4g01909 472 Gene3D Transcription termination factor 3, mitochondrial 249 468 IPR038538 -
Phac4g01909 472 SMART mt_12 205 236 IPR003690 GO:0003690|GO:0006355
Phac4g01909 472 SMART mt_12 312 343 IPR003690 GO:0003690|GO:0006355
Phac4g01909 472 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
Phac4g01909 472 SMART mt_12 381 412 IPR003690 GO:0003690|GO:0006355
Phac4g01909 472 SMART mt_12 345 376 IPR003690 GO:0003690|GO:0006355
Phac4g01909 472 SMART mt_12 277 307 IPR003690 GO:0003690|GO:0006355
Phac4g01909 472 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Phac4g01909 472 Pfam mTERF 55 302 IPR003690 GO:0003690|GO:0006355
Phac4g01909 472 Pfam mTERF 291 458 IPR003690 GO:0003690|GO:0006355
Phac4g01909 472 Pfam mTERF 191 364 IPR003690 GO:0003690|GO:0006355
Phac4g01909 472 PANTHER CGI-12 PROTEIN-RELATED 170 463 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01909 Phac-Chr4 46009745 46013134 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac4g01909 mTERF 5.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01909 K15032 - gmx:100781900 802.742