Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01908 ATGAAGACTTTCTCCTTAATTCAACTACCCCACCATTTTTTTTGTGCAAGATTCTTCTCTTACACAACCACGAGGACTCAACTTTCTTTTCCTGCAAAGGTCTTCATTTGCCAGGCAAAATCAGGCATAGATGGGTCATTGAATTTAAAAGTGGTGTCTCCCACTCTGTTAGTAGCAGAAAAGGAAGAAGCCAAGGCTGTATTGACCTTGTTCTTGAAGAAACAAGGTTCGAGCAATGCGGTTGCTGCTAGAACCATCAACAAGTCAGATCTTTTTATTGATCACCTTGTCTCAAAGCTTCATTCTAAACACAAGTCTTGGTATCTTGCAGGAAGAGAGCTTACAACTTTGGAGATCAGGGATGCTCTTATCCCTTATCTGGAATCTCTTTTTGAAGAGCATGGTGACACTCTGGTGGATATAGTGGAAAACTATCCAAATCCACCTGTTAAAGACAAATCAGAAGTGCTAGTTTCTCCTTCTAGTCCAGTGTTAGACTCTAAAAAGCTTAAAGCTGTGTCACTAGTGAGTGAGACAGACCCAGATGGTGGCAATCTGCGCCCTCATATTGTCTATCTCATAGAACTTGGTATGGATATCAAGCAGATTCGGAGTATCACACACCGATTCCCAGCTTTTGCCTACTATAGCTTGGAGGGTAAAATTAAGCCAGTGGTTGAGTTTTTTCTTGAACTTGGAGTGCCAAGAGAGCACATTCCCACTATCCTCAGTAAAAGGCCTCAATTATGTGGTATCAGTTTATCTGAAAATCTTAAACCCACCATGAGGTTCTTAGAATCATTGGGTGTTGATGAGAAGCAATGGCCAAAGCTGATCTATCGCTTCCCGGCCCTGCTAACTTATAGCCGGCAGAAAGTGATGGAAAGCATAGATTTCCTTCATGAATTGGGCCTCTCTGAAGAGAATATAGGGAAGATTTTAACTCGTTGCCCCAATATCGTTAGTTACAGTGTAGAGGACAATCTCCGACCCACAGCTAAGTACTTCCGTTCTTTGGGGGCTGATGTTGGCATTCTTCTATTCAGATGCCCACAGAATTTTGGTCTTAGCATTGAGGCCAACCTAAAACCTATAACAGCATTTTTCTTGGAGAGGGGATACACTTTGGAAGAAATTGGGACCATGATTTCAAGATATGGAGCCTTGTATACTTTCAGCTTGACTGAAAATTTGATTCCAAAATGGGATTTCTTTTTGACCACAGGATACCCAAAATCTGAGCTGGTTAAGTTCCCTCAGTATTTTGGATACAGTTTAGAGAAAAGGATTAAACCTAGATTTTCAATTATGGAGAAATCTGGAGTAAGGTTACTTCTGAATCAGGTTCTTTCTCTGTCAAGCAGCAACTTTGACAAGGCCTTGAAAAAGAAAATGAAAAAAATGCAAGATGGTTAG 1416 0.4089 MKTFSLIQLPHHFFCARFFSYTTTRTQLSFPAKVFICQAKSGIDGSLNLKVVSPTLLVAEKEEAKAVLTLFLKKQGSSNAVAARTINKSDLFIDHLVSKLHSKHKSWYLAGRELTTLEIRDALIPYLESLFEEHGDTLVDIVENYPNPPVKDKSEVLVSPSSPVLDSKKLKAVSLVSETDPDGGNLRPHIVYLIELGMDIKQIRSITHRFPAFAYYSLEGKIKPVVEFFLELGVPREHIPTILSKRPQLCGISLSENLKPTMRFLESLGVDEKQWPKLIYRFPALLTYSRQKVMESIDFLHELGLSEENIGKILTRCPNIVSYSVEDNLRPTAKYFRSLGADVGILLFRCPQNFGLSIEANLKPITAFFLERGYTLEEIGTMISRYGALYTFSLTENLIPKWDFFLTTGYPKSELVKFPQYFGYSLEKRIKPRFSIMEKSGVRLLLNQVLSLSSSNFDKALKKKMKKMQDG* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01908 471 Gene3D Transcription termination factor 3, mitochondrial 249 467 IPR038538 -
Phac4g01908 471 Pfam mTERF 54 301 IPR003690 GO:0003690|GO:0006355
Phac4g01908 471 Pfam mTERF 190 363 IPR003690 GO:0003690|GO:0006355
Phac4g01908 471 Pfam mTERF 290 457 IPR003690 GO:0003690|GO:0006355
Phac4g01908 471 PANTHER CGI-12 PROTEIN-RELATED 169 462 IPR003690 GO:0003690|GO:0006355
Phac4g01908 471 SMART mt_12 412 443 IPR003690 GO:0003690|GO:0006355
Phac4g01908 471 SMART mt_12 204 235 IPR003690 GO:0003690|GO:0006355
Phac4g01908 471 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Phac4g01908 471 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Phac4g01908 471 SMART mt_12 344 375 IPR003690 GO:0003690|GO:0006355
Phac4g01908 471 SMART mt_12 380 411 IPR003690 GO:0003690|GO:0006355
Phac4g01908 471 SMART mt_12 276 306 IPR003690 GO:0003690|GO:0006355
Phac4g01908 471 FunFam Transcription termination factor MTERF5 chloroplastic 247 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01908 Phac-Chr4 46009745 46013134 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac4g01908 mTERF 5.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01908 K15032 - gmx:100781900 807.364