Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01905 ATGCCCCAGAATAAGATTTTCCGAGAGCAATCATCGAATCAGATTCCTGATCTTTCCCTTCACATTAGCCTCCCAAACAGTGCTCCTTCTTCAATTTGCAGTGGAGGGGATTCAACCTTTGATACATGGCCACAACAAGCAGATGATGACGATGCTGAAGGCTTCAAATCCCACAGTGATGGTTCAATCAAAGACACACAACTGTCTTTAGCCAACTCTACAAGTGCTGTCACTGCTGCTGCTCCCTCTGAGGCTGAAACCACCTGGAGGAAGAGAAACTTTGTCGGACTTAGCCATCATCGGGTTTCTGAGGCTCAAATAAGACTCATCAATGGAATCCCTCTCTACAGTAACCTTTCTAACAACAGTGCAGGAGAACCCATCTCAAGGCCCCAACAGTTTCAGTACTTTGATTACCCTCAGCAGCAGTTTGGGAACAGTACAAATTTTGGAGCTTCTGAATTCTCCAATGGATTTGTGAGGTCAAGAATGTTGCCTAGGCAACAAAGTAATAAGAGGAACATGAGGGCTCCAAGAATGCGTTGGACTAGCTCTCTTCACAATCGCTTTGTTCATGCTGTTCAACTTCTTGGTGGCCATGAAAGGGCTACTCCTAAGTCAGTTTTGGAACTAATGGATGTGAAAGATCTAACACTAGCTCATGTAAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAACACTGACAAACCTGCAGCTTCTTCAGATGGGGATGAGGATTTCATGTCCCTAACAGTCCCAAATAATCAAAATAAGAATTTTTTACCCAATCAGAGAGGAGCCTCCATGGATTGTGACATGGGCTACACTTCCAGCAATCTATGGGCTAATTCTTCTACCAGTAGAGGAGCACGGATACAAGCTAGTTCCCTTGATTTGGATAAGCTTAGTCCCCAAGAAATCCTATCATCTCAGCATTCTGGGAAACTTTCTGAGGGAAACAACTACACACAAACAAGAAGCTTCAAGGATCAAAATCCAAGCTTGGAGTTCAGTTTAGGGAGATCAACTTGGCACAACAATGAACATGCCTGA 1056 0.4384 MPQNKIFREQSSNQIPDLSLHISLPNSAPSSICSGGDSTFDTWPQQADDDDAEGFKSHSDGSIKDTQLSLANSTSAVTAAAPSEAETTWRKRNFVGLSHHRVSEAQIRLINGIPLYSNLSNNSAGEPISRPQQFQYFDYPQQQFGNSTNFGASEFSNGFVRSRMLPRQQSNKRNMRAPRMRWTSSLHNRFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLTVPNNQNKNFLPNQRGASMDCDMGYTSSNLWANSSTSRGARIQASSLDLDKLSPQEILSSQHSGKLSEGNNYTQTRSFKDQNPSLEFSLGRSTWHNNEHA* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01905 351 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 350 IPR044847 GO:0000976|GO:0006355|GO:0010158
Phac4g01905 351 FunFam Myb family transcription factor 176 234 - -
Phac4g01905 351 SUPERFAMILY Homeodomain-like 175 232 IPR009057 -
Phac4g01905 351 MobiDBLite consensus disorder prediction 309 345 - -
Phac4g01905 351 Pfam Myb-like DNA-binding domain 179 230 IPR001005 -
Phac4g01905 351 MobiDBLite consensus disorder prediction 309 351 - -
Phac4g01905 351 NCBIfam myb-like DNA-binding domain, SHAQKYF class 178 231 IPR006447 GO:0003677
Phac4g01905 351 Gene3D - 177 234 - -
Phac4g01905 351 MobiDBLite consensus disorder prediction 33 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01905 Phac-Chr4 45986516 45996308 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01905 158 346 G2-like Transcription Factor Family AT5G16560 49.754 2.12e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac4g01905 Myb_DNA-binding 8.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01905 - - pvu:PHAVU_004G1468001 550.051