Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01904 ATGCCCCAGAATAAGATTTTCCGAGAGCAATCATCGAATCAGATTCCTGATCTTTCCCTTCACATTAGCCTCCCAAACAGTGCTCCTTCTTCAATTTGCAGTGGAGGGGATTCAACCTTTGATACATGGCCACAACAAGCAGATGATGACGATGCTGAAGGCTTCAAATCCCACAGTGATGGTTCAATCAAAGACACACAACTGTCTTTAGCCAACTCTACAAGTGCTGTCACTGCTGCTGCTCCCTCTGAGGCTGAAACCACCTGGAGGAAGAGAAACTTTGTCGGACTTAGCCATCATCGGGTTTCTGAGGCTCAAATAAGACTCATCAATGGAATCCCTCTCTACAGTAACCTTTCTAACAACAGTGGAGAACCCATCTCAAGGCCCCAACAGTTTCAGTACTTTGATTACCCTCAGCAGCAGTTTGGGAACAGTACAAATTTTGGAGCTTCTGAATTCTCCAATGGATTTGTGAGGTCAAGAATGTTGCCTAGGCAACAAAGTAATAAGAGGAACATGAGGGCTCCAAGAATGCGTTGGACTAGCTCTCTTCACAATCGCTTTGTTCATGCTGTTCAACTTCTTGGTGGCCATGAAAGGGCTACTCCTAAGTCAGTTTTGGAACTAATGGATGTGAAAGATCTAACACTAGCTCATGTAAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAACACTGACAAACCTGCAGCTTCTTCAGATGGGGATGAGGATTTCATGTCCCTAACAGTCCCAAATAATCAAAATAAGAATTTTTTACCCAATCAGAGAGGAGCCTCCATGGATTGTGACATGGGCTACACTTCCAGCAATCTATGGGCTAATTCTTCTACCAGTAGAGGAGCACGGATACAAGCTAGTTCCCTTGATTTGGATAAGCTTAGTCCCCAAGAAATCCTATCATCTCAGCATTCTGGGAAACTTTCTGAGGGAAACAACTACACACAAACAAGAAGCTTCAAGGATCAAAATCCAAGCTTGGAGTTCAGTTTAGGGAGATCAACTTGGCACAACAATGAACATGCCTGA 1053 0.4378 MPQNKIFREQSSNQIPDLSLHISLPNSAPSSICSGGDSTFDTWPQQADDDDAEGFKSHSDGSIKDTQLSLANSTSAVTAAAPSEAETTWRKRNFVGLSHHRVSEAQIRLINGIPLYSNLSNNSGEPISRPQQFQYFDYPQQQFGNSTNFGASEFSNGFVRSRMLPRQQSNKRNMRAPRMRWTSSLHNRFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLTVPNNQNKNFLPNQRGASMDCDMGYTSSNLWANSSTSRGARIQASSLDLDKLSPQEILSSQHSGKLSEGNNYTQTRSFKDQNPSLEFSLGRSTWHNNEHA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01904 350 FunFam Myb family transcription factor 175 233 - -
Phac4g01904 350 SUPERFAMILY Homeodomain-like 174 231 IPR009057 -
Phac4g01904 350 NCBIfam myb-like DNA-binding domain, SHAQKYF class 177 230 IPR006447 GO:0003677
Phac4g01904 350 Gene3D - 176 233 - -
Phac4g01904 350 Pfam Myb-like DNA-binding domain 178 229 IPR001005 -
Phac4g01904 350 MobiDBLite consensus disorder prediction 308 344 - -
Phac4g01904 350 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 349 IPR044847 GO:0000976|GO:0006355|GO:0010158
Phac4g01904 350 MobiDBLite consensus disorder prediction 308 350 - -
Phac4g01904 350 MobiDBLite consensus disorder prediction 33 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01904 Phac-Chr4 45986516 45996308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01904 157 345 G2-like Transcription Factor Family AT5G16560 49.754 2.15e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac4g01904 Myb_DNA-binding 8.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01904 - - pvu:PHAVU_004G1468001 548.51