Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01900 ATGCCCCAGAATAAGATTTTCCGAGAGCAATCATCGAATCAGATTCCTGATCTTTCCCTTCACATTAGCCTCCCAAACAGTGCTCCTTCTTCAATTTGCAGTGGAGGGGATTCAACCTTTGATACATGGCCACAACAAGCAGATGATGACGATGCTGAAGGCTTCAAATCCCACAGTGATGGTTCAATCAAAGACACACAACTGTCTTTAGCCAACTCTACAAGTGCTGTCACTGCTGCTGCTCCCTCTGAGGCTGAAACCACCTGGAGGAAGAGAAACTTTGTCGGACTTAGCCATCATCGGGTTTCTGAGGCTCAAATAAGACTCATCAATGGAATCCCTCTCTACATTCCACACCCTCCTTCTTCTGCCAATTCGGCTCCTAACTTTAGTTATAATGGTGCTGTTGGGGGTGTAGCAGGAGAACCCATCTCAAGGCCCCAACAGTTTCAGTACTTTGATTACCCTCAGCAGCAGTTTGGGAACAGTACAAATTTTGGAGCTTCTGAATTCTCCAATGGATTTGTGAGGTCAAGAATGTTGCCTAGGCAACAAAGTAATAAGAGGAACATGAGGGCTCCAAGAATGCGTTGGACTAGCTCTCTTCACAATCGCTTTGTTCATGCTGTTCAACTTCTTGGTGGCCATGAAAGGGCTACTCCTAAGTCAGTTTTGGAACTAATGGATGTGAAAGATCTAACACTAGCTCATGTAAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAACACTGACAAACCTGCAGCTTCTTCAGATGGGGATGAGGATTTCATGTCCCTAACAGTCCCAAATAATCAAAATAAGAATTTTTTACCCAATCAGAGAGGAGCCTCCATGGATTGTGACATGGGCTACACTTCCAGCAATCTATGGGCTAATTCTTCTACCAGTAGAGGAGCACGGATACAAGCTAGTTCCCTTGATTTGGATAAGCTTAGTCCCCAAGAAATCCTATCATCTCAGCATTCTGGGAAACTTTCTGAGGGAAACAACTACACACAAACAAGAAGCTTCAAGGATCAAAATCCAAGCTTGGAGTTCAGTTTAGGGAGATCAACTTGGCACAACAATGAACATGCCTGA 1104 0.442 MPQNKIFREQSSNQIPDLSLHISLPNSAPSSICSGGDSTFDTWPQQADDDDAEGFKSHSDGSIKDTQLSLANSTSAVTAAAPSEAETTWRKRNFVGLSHHRVSEAQIRLINGIPLYIPHPPSSANSAPNFSYNGAVGGVAGEPISRPQQFQYFDYPQQQFGNSTNFGASEFSNGFVRSRMLPRQQSNKRNMRAPRMRWTSSLHNRFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLTVPNNQNKNFLPNQRGASMDCDMGYTSSNLWANSSTSRGARIQASSLDLDKLSPQEILSSQHSGKLSEGNNYTQTRSFKDQNPSLEFSLGRSTWHNNEHA* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01900 367 MobiDBLite consensus disorder prediction 325 361 - -
Phac4g01900 367 MobiDBLite consensus disorder prediction 325 367 - -
Phac4g01900 367 MobiDBLite consensus disorder prediction 33 63 - -
Phac4g01900 367 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 366 IPR044847 GO:0000976|GO:0006355|GO:0010158
Phac4g01900 367 NCBIfam myb-like DNA-binding domain, SHAQKYF class 194 247 IPR006447 GO:0003677
Phac4g01900 367 SUPERFAMILY Homeodomain-like 191 248 IPR009057 -
Phac4g01900 367 FunFam Myb family transcription factor 192 250 - -
Phac4g01900 367 Gene3D - 193 250 - -
Phac4g01900 367 Pfam Myb-like DNA-binding domain 195 246 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01900 Phac-Chr4 45986516 45996308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01900 174 362 G2-like Transcription Factor Family AT5G16560 49.754 3.34e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac4g01900 Myb_DNA-binding 8.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01900 - - pvu:PHAVU_004G1468001 591.267