Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01899 ATGCCCCAGAATAAGATTTTCCGAGAGCAATCATCGAATCAGATTCCTGATCTTTCCCTTCACATTAGCCTCCCAAACAGTGCTCCTTCTTCAATTTGCAGTGGAGGGGATTCAACCTTTGATACATGGCCACAACAAGCAGATGATGACGATGCTGAAGGCTTCAAATCCCACAGTGATGGTTCAATCAAAGACACACAACTGTCTTTAGCCAACTCTACAAGTGCTGTCACTGCTGCTGCTCCCTCTGAGGCTGAAACCACCTGGAGGAAGAGAAACTTTGTCGGACTTAGCCATCATCGGGTTTCTGAGGCTCAAATAAGACTCATCAATGGAATCCCTCTCTACAGTAACCTTTCTAACAACAGTGGTACAGTTCCCTCAATAGATAGAAGCCCCACCAACAAGTTTTCCTTTTCTTCTCTATATGCAGTTCCACACCCTCCTTCTTCTGCCAATTCGGCTCCTAACTTTAGTTATAATGGTGCTGTTGGGGGTGTAGCAGGAGAACCCATCTCAAGGCCCCAACAGTTTCAGTACTTTGATTACCCTCAGCAGCAGTTTGGGAACAGTACAAATTTTGGAGCTTCTGAATTCTCCAATGGATTTGTGAGGTCAAGAATGTTGCCTAGGCAACAAAGTAATAAGAGGAACATGAGGGCTCCAAGAATGCGTTGGACTAGCTCTCTTCACAATCGCTTTGTTCATGCTGTTCAACTTCTTGGTGGCCATGAAAGGGCTACTCCTAAGTCAGTTTTGGAACTAATGGATGTGAAAGATCTAACACTAGCTCATGTAAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAACACTGACAAACCTGCAGCTTCTTCAGATGGGGATGAGGATTTCATGTCCCTAACAGTCCCAAATAATCAAAATAAGAATTTTTTACCCAATCAGAGAGGAGCCTCCATGGATTGTGACATGGGCTACACTTCCAGCAATCTATGGGCTAATTCTTCTACCAGTAGAGGAGCACGGATACAAGCTAGTTCCCTTGATTTGGATAAGCTTAGTCCCCAAGAAATCCTATCATCTCAGCATTCTGGGAAACTTTCTGAGGGAAACAACTACACACAAACAAGAAGCTTCAAGGATCAAAATCCAAGCTTGGAGTTCAGTTTAGGGAGATCAACTTGGCACAACAATGAACATGCCTGA 1188 0.4394 MPQNKIFREQSSNQIPDLSLHISLPNSAPSSICSGGDSTFDTWPQQADDDDAEGFKSHSDGSIKDTQLSLANSTSAVTAAAPSEAETTWRKRNFVGLSHHRVSEAQIRLINGIPLYSNLSNNSGTVPSIDRSPTNKFSFSSLYAVPHPPSSANSAPNFSYNGAVGGVAGEPISRPQQFQYFDYPQQQFGNSTNFGASEFSNGFVRSRMLPRQQSNKRNMRAPRMRWTSSLHNRFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLTVPNNQNKNFLPNQRGASMDCDMGYTSSNLWANSSTSRGARIQASSLDLDKLSPQEILSSQHSGKLSEGNNYTQTRSFKDQNPSLEFSLGRSTWHNNEHA* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01899 395 MobiDBLite consensus disorder prediction 353 389 - -
Phac4g01899 395 SUPERFAMILY Homeodomain-like 219 276 IPR009057 -
Phac4g01899 395 MobiDBLite consensus disorder prediction 353 395 - -
Phac4g01899 395 NCBIfam myb-like DNA-binding domain, SHAQKYF class 222 275 IPR006447 GO:0003677
Phac4g01899 395 Pfam Myb-like DNA-binding domain 223 274 IPR001005 -
Phac4g01899 395 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 394 IPR044847 GO:0000976|GO:0006355|GO:0010158
Phac4g01899 395 Gene3D - 221 278 - -
Phac4g01899 395 MobiDBLite consensus disorder prediction 33 61 - -
Phac4g01899 395 FunFam Myb family transcription factor 220 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01899 Phac-Chr4 45986516 45996308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01899 15 390 G2-like Transcription Factor Family AT5G16560 34.963 2.42e-49 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac4g01899 Myb_DNA-binding 9.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01899 - - pvu:PHAVU_004G1468001 576.63