Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01881 ATGGAAAATTCTTCATCTTCTTCCTCTTCAAATTCTATATATCGAGAGTGTCTCCGCAACCATGCAGCGAGCCTAGGCAGCTACGCTACGGATGGTTGTGGAGAATTCACTCTCGATATAGATGTCTCCTCTTCCACTCTCCAGTGCGCAGCTTGCGGTTGTCACCGCAACTTCCACCGCAAGGTGACGTGTCCTCTTGCGGTGGAAGGGCTGGCTGGAGGAGGAAGTGGAGACATGATGGAGTACTCTGGAGGAGATGTGGGGAGAATGGAGGTGGGGGAGAGGAGCAGCAGGAAGAGGTTCAGGACCAAGTTCAGTGCGGAGCAGAAGGAGAAGATGCTGGGGTTTGCAGAGAAGCTGGGGTGGAAGCTGCAGAGGAAAGAGGTGGATGATGAGATTGAGAGGTTTTGTAAAAGCGTCGGAGTGACTAGACAGGTTTTCAAGGTGTGGATGCATAACCATAAAAACAACTCTAACTCATCTAATTCTTCTGCTAATCTCTCTTCTCTCACTCAGTGA 519 0.501 MENSSSSSSSNSIYRECLRNHAASLGSYATDGCGEFTLDIDVSSSTLQCAACGCHRNFHRKVTCPLAVEGLAGGGSGDMMEYSGGDVGRMEVGERSSRKRFRTKFSAEQKEKMLGFAEKLGWKLQRKEVDDEIERFCKSVGVTRQVFKVWMHNHKNNSNSSNSSANLSSLTQ* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01881 172 NCBIfam homeobox domain, ZF-HD class 98 156 IPR006455 -
Phac4g01881 172 FunFam Zinc-finger homeodomain protein 2 87 160 - -
Phac4g01881 172 Pfam ZF-HD protein dimerisation region 13 63 IPR006456 -
Phac4g01881 172 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 14 61 IPR006456 -
Phac4g01881 172 Gene3D - 83 162 - -
Phac4g01881 172 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 14 62 IPR006456 -
Phac4g01881 172 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 8 157 - -
Phac4g01881 172 SUPERFAMILY Homeodomain-like 91 157 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01881 Phac-Chr4 45920654 45921818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01881 14 155 ZF-HD Transcription Factor Family AT1G14440 41.398 2.12e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phac4g01881 ZF-HD_dimer 8.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01881 - - vun:114182488 296.204