Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01880 ATGGATGGTGATAATGGTCTTATCATTCGTAATTGGGGTTACTATGAACCGGCCACATCGTTTAAGAGCCACCTGGGGCTGCAGCTGATGTCATCCATGCCGGAAAAGCCTTTAATCGGAGGGCGCAATGCTGCAGTTTTATCTGGCACTAATGGAGCATTTCACCACAGGGACATTGGCATGTCCCAAACTACATACCCTATGGAATACATGAGGGATGCTTGGATCAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAATCATAACTATGGTGGTATTCCGGAGACTTCTTCGGCACATCATATTCAAATGATTCCACCACCGGAATTGCCGAAGGAAGAAAGGGCAGTGGAAGAGGAACCTGTTGTTGAGAAGGCAAGTGGGGGCACTCGTAAGAAAAGACAGAACCCCAAGGTGCCCAAATCTCCCAAGGCCAAGAAGTCCAAGAGGGGCCCTCGTGTGCCAAAGAACGAGAATGCTCCCACAGTACAACGTGCAAGGGTTCCCAAGAAAACTACTGAAATTGTGATAAATGGAATTGACATGGATATTTCTAGTATTCCAATCCCTGTTTGTTCATGCACTGGAGGTCCTCAACAGTGTTACAGATGGGGCTCTGGTGGTTGGCAATCTGCATGTTGCACAACAGGGATGTCAGTGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGCAGGAAAATGAGTATAGGAGCGTTTAAGAAAGTTTTAGAGAAACTTGCAGCCGAAGGTTATAACTTTTCTAATCCGATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATTAGGTAG 852 0.4577 MDGDNGLIIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLSGTNGAFHHRDIGMSQTTYPMEYMRDAWISSQREKYMNMIPTNHNYGGIPETSSAHHIQMIPPPELPKEERAVEEEPVVEKASGGTRKKRQNPKVPKSPKAKKSKRGPRVPKNENAPTVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGGPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01880 283 MobiDBLite consensus disorder prediction 110 134 - -
Phac4g01880 283 MobiDBLite consensus disorder prediction 135 154 - -
Phac4g01880 283 SMART GAGA_bind_2 1 283 IPR010409 -
Phac4g01880 283 MobiDBLite consensus disorder prediction 99 170 - -
Phac4g01880 283 PANTHER - 1 283 IPR010409 -
Phac4g01880 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01880 Phac-Chr4 45899126 45901957 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01880 1 283 BBR or BPC Transcription factor family AT2G01930 51.342 1.01e-94 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Phac4g01880 GAGA_bind 2.6e-109 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01880 - - gmx:100784091 516.153