Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01876 ATGGATGGTGATAATGGCCTTAACATCCGTAATTGGGGTTACTATGAACCGGCCACATCGTTTAAGAGCCACCTGGGGCTGCAGCTGATGTCATCCATGCCGGAAAAGCCTTTAATCGGAGGGCGCAATGCTGCAGTTTTATCTGGCACTAATGGAGCATTTCACCACAGGGACATTGGTATGTCCCAAACTACATACCCTATGGAATACATGAGGGATGCTTGGATCAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAATCATAACTATGGTGGTATTCCGGAGACTTCTTCGGCACATCATATTCAAATGATTCCACCACCGGAATTGCCGAAGGAAGAAAGGGCAGTGGAAGAGGAACCTGTTGTTGAGAAGGCAAGTGGGGGCACTCGTAAGAAAAGACAGAACCCCAAGGTGCCCAAATCTCCCAAGGCTAAGAAGTCCAAGAGGGGCCCTCGTGTGCCAAAGAATGAAAATGCTCCCACAGTTCAACGTGCAAGGGTTCCCAAGAAAACTACTGAAATTGTGATAAATGGAATTGACATGGATATTTCTAGTATTCCAATCCCTGTTTGTTCATGCACTGGAGGTCCTCAACAGTGTTACAGATGGGGCTCTGGTGGTTGGCAATCTGCATGTTGCACAACAGGGATGTCAGTGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCGTTTAAGAAAGTTTTAGAGAAACTTGCAGCCGAAGGTTATAACTTTTCTAATCCGATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACCATTAGGTAG 852 0.4554 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLSGTNGAFHHRDIGMSQTTYPMEYMRDAWISSQREKYMNMIPTNHNYGGIPETSSAHHIQMIPPPELPKEERAVEEEPVVEKASGGTRKKRQNPKVPKSPKAKKSKRGPRVPKNENAPTVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGGPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01876 283 MobiDBLite consensus disorder prediction 110 134 - -
Phac4g01876 283 MobiDBLite consensus disorder prediction 135 154 - -
Phac4g01876 283 SMART GAGA_bind_2 1 283 IPR010409 -
Phac4g01876 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Phac4g01876 283 MobiDBLite consensus disorder prediction 99 170 - -
Phac4g01876 283 PANTHER - 1 283 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01876 Phac-Chr4 45893054 45895109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01876 1 283 BBR or BPC Transcription factor family AT2G01930 51.342 8.89e-95 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Phac4g01876 GAGA_bind 3.5e-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01876 - - gmx:100784091 519.62