Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01862 ATGTGCAGTAGAGGCCATTGGAGGCCAGCTGAGGATGAGAAGCTTCGAGAATTGGTGGAACGCTATGGACCTCATAACTGGAACGCCATAGCAGAGAAGCTTCGAGGAAGATCAGGGAAAAGCTGTAGGTTGAGATGGTTCAATCAACTGGACCCAAGAATAAACAGAAGTCCTTTTACAGAGGAAGAAGAAGAGAGGCTTCTTGCTTCTCACAGGATTCATGGGAATAGATGGGCTGTGATTGCAAGACACTTCCCAGGAAGAACTGATAACGCTGTAAAAAACCATTGGCATGTGATGATGGCAAGGATTCGAAGAGAAAGGTCCAAAGTTTATAACACAAAACAGCCACTTTTCCCTCCAAACCTTGACAACAATTTTGAGACTTCTATCCCTTCTTTTGTTGAGAAGTATTATGAAAAGTTCAGCCACCACCACCCTTGTGTCACAAACACACCTTTTCACTTTGCCAAGAAGTTTCACTTTCAAGATCCAACTTCTGCTTCCACAGTGCCTCCAGAGAAGAGTCAATCAGTAGAGTTCTATGATTTTCTTCAAGTAAATACAGATTCCAATAAAAGTGAAGTGACAGACATAGCCAGAAGAGACGAAGAGGAAGTGAGTCAAGATGGTGTGGAACTGAAGAACATTGGTGTTCCATTCATTGATTTTTTGTCTTCTGGAACCTCCTAA 693 0.4257 MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERSKVYNTKQPLFPPNLDNNFETSIPSFVEKYYEKFSHHHPCVTNTPFHFAKKFHFQDPTSASTVPPEKSQSVEFYDFLQVNTDSNKSEVTDIARRDEEEVSQDGVELKNIGVPFIDFLSSGTS* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01862 230 FunFam MYB transcription factor 4 55 - -
Phac4g01862 230 PANTHER MYB PROTEIN-RELATED 4 168 - -
Phac4g01862 230 Gene3D - 4 55 - -
Phac4g01862 230 Pfam Myb-like DNA-binding domain 7 67 - -
Phac4g01862 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Phac4g01862 230 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Phac4g01862 230 SMART sant 55 103 IPR001005 -
Phac4g01862 230 SMART sant 3 52 IPR001005 -
Phac4g01862 230 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Phac4g01862 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Phac4g01862 230 Gene3D - 57 117 - -
Phac4g01862 230 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Phac4g01862 230 CDD SANT 58 101 IPR001005 -
Phac4g01862 230 CDD SANT 7 48 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01862 Phac-Chr4 45740031 45743191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01862 1 230 MYB Transcription Factor Family AT1G17950 57.430 1.19e-87 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac4g01862 Myb_DNA-bind_6 8.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01862 K09422 - gmx:100811746 389.423