Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01858 ATGAATGCTTCAATGAGGAAAAAGGTTCAAAGGAATTGTAAGATAAGAGGCTACAATCTCAAAGTCGATGCTCTCGACGAGATCCTCTCCTTCGCCTCTCGCTTCGAAGGCAACGAAGAAGAAGCCATCGATCTCCTCCTCGACAAGCTCGACGAGCTCGAAAATTCTCTGAAATCCACCATAATCGACAAGGACACGGTGAACCGCGCGGTGAGCCTGCTACTGGAAGTTGTGGAGGATAGCTCCGATCCCGGCGACAGCACCGGAATCTCTTCTGCCTTTCGCGTTATCGATGCGTTCCACGTCCCGAAGTTTAAATACGACAATATCAGAAAGCAGTTCTATGAGCATACAGGCACCTTGTCTATTCACGGAGAAGCATCAGGTAAAGCAGCTTTGTACAGGGATAGGTTTCTATTATTGTCCCAGAGGCTCTCTCGTGACCAGCATTTTTCCAAACCTGCTTTTGAATCTGAATTTTCTCATTTCGGGAGTTGTGAGATATCTCCTATTCAATCTCTGGTTGGGCAAACAGGTAGAAGATGGGTGATGGGCGTAATATCTCAGCTGGAAGATGGTCATTACTATTTGGAAGACCTTACAGCTGCAGTTAAAATTAACTTGTCCAATGCAAAGATAACTACAGGACTCTTTTCAGAGAACACTATAGTTGTGGTCGAAGGGGAGATGCTTCTGGAGGGTATTTTTCAGGTCTTAACATGTGGATTTCCTCCATTGGAGGATAGAAATAAGTCACTGAAAGTACTTTCAGGGCATGACTTTTTTGGTGGTGGTACTCTTACAAAAGAGGAAACTATTAGACTGGAAGAGATGGAGAAAAGAGCAGTAAATGACATGTTTGTCATACTTTCTGATGTTTGGCTAGACAAAGAAGAGGCTTTGACAAAGGTAGAGACTATTCTGGATGGTTTTGAGAGTGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTGTTCTAGGCCATGTAACCTTTCATTTCATTCTTATTCGAGCCTCAGAATGCAATTTGGTAAGCTGGGGGAAATGATTGCCGCCCATACACGGCTGAAAGAGCAGAGTCGATTTCTTTTTATTCCAGGTCCTGATGATGCAGGTCCTTCTACAGTTCTTCCTAGGTGCGCTTTACCAAAATATTTAACTGATGAGCTCCAAAAGCACATACCCAATGCCATATTTTCAAGCAACCCTTGCAGGGTCAAATTTTATACCCAAGAAATTGTATTTTTCCGCCAGGATATGCTGCATAGAATGCGTCGCTCATGTTTGATGTCTCCTTCTATAGAAGAAACCGATGATCATTTTCAACATGTATTTTGTCCCTTGGATGTTATCTACTTTATTTTCTTATGGTTTTTAGTTCTTGAATTTTTTTTACAGTATTAG 1413 0.4225 MNASMRKKVQRNCKIRGYNLKVDALDEILSFASRFEGNEEEAIDLLLDKLDELENSLKSTIIDKDTVNRAVSLLLEVVEDSSDPGDSTGISSAFRVIDAFHVPKFKYDNIRKQFYEHTGTLSIHGEASGKAALYRDRFLLLSQRLSRDQHFSKPAFESEFSHFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHYYLEDLTAAVKINLSNAKITTGLFSENTIVVVEGEMLLEGIFQVLTCGFPPLEDRNKSLKVLSGHDFFGGGTLTKEETIRLEEMEKRAVNDMFVILSDVWLDKEEALTKVETILDGFESVEVVPSLFVFMGNFCSRPCNLSFHSYSSLRMQFGKLGEMIAAHTRLKEQSRFLFIPGPDDAGPSTVLPRCALPKYLTDELQKHIPNAIFSSNPCRVKFYTQEIVFFRQDMLHRMRRSCLMSPSIEETDDHFQHVFCPLDVIYFIFLWFLVLEFFLQY* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01858 470 PIRSF DNA_pol_epsilon_2 1 451 IPR016266 GO:0003677|GO:0006261|GO:0008622
Phac4g01858 470 Coils Coil 36 63 - -
Phac4g01858 470 Gene3D - 2 72 - -
Phac4g01858 470 Pfam DNA polymerase alpha/epsilon subunit B 287 447 IPR007185 GO:0003677|GO:0006260
Phac4g01858 470 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 1 447 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01858 Phac-Chr4 45717319 45723963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01858 16 460 Core DNA Replication Machinery Family AT5G22110 66.154 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01858 K02325 - gmx:100784116 728.398