Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01853 ATGGTTATCACATCCACTGCCACACACCCAGATGAAAAAGATGAGCATCTATCGTCGACTTTTGCTTCCAGATATGTGCGTCAACCTATTCCCAAGTTCAAGATGGCAGATAGTTCCATGCCAAAGGATGTTGCTTATCAGTTAATAAACGATGAGTTGATGTTGGATGGCGCACCAAGGCTCAACTTGGCCTCATTTGTTACCACTTGGATGGAGCCTGAGTGTGAAAAGCTCATGATGGCCTCACTTAACAAGAACTATGTTGACATGGATGAGTACCCTGTCACCACTGAGCTTCAGAATCGGTGTGTCAATATAATAGCAAATCTATTTCATGCTCCTCTAAGAGAAGAAGAGACTGCAGTAGGTGTGGGAACTGTGGGTTCATCTGAGGCAATAATGTTAGCTGGTTTGGCTTTTAAAAGGAAATGGCAGACCAAGAGAAAAGCAGAAGGCAAACCATATGACAAGCCTAACATAGTTACTGGGGCTAACGTGCAGGTTTGTTGGGAAAAATTCGCAAGGTACTTTGAGGTAGAGCTTAAGGAAGTGAAACTCAGTGAGGGATACTATGTGATGGATCCTGTGAAAGCAGTTGAAATGGTGGATGAGAACACCATCTGTGTTGCAGCCATTTTGGGATCAACTATGACTGGAGAGTTTGAGGATGTGAAGCTTCTCAGTGAACTTCTCACTGAAAAGAACAAGGAGACAGGTTGGGATACCCCAATTCATGTAGATGCTGCAAGTGGGGGTTTTATTGCCCCATTTCTGTATCCTGATCTAGAGTGGGATTTTCGTTTGCCATTGGTGAAAAGCATCAATGTTAGTGGCCACAAGTATGGTCTTGTATACCCTGGTGTTGGTTGGGTTGTCTGGAGGAGTAAGGATGACTTGCCAGATGAACTTGTTTTTCACATCAATTATCTTGGATCTGATCAGCCAACATTCACATTGAATTTCTCCAAAGGATCCAGTCAAATCATTGCTCAATATTACCAATTTATTCGGCTTGGCTTTGAGGGTTACAAAAATATCATGGAAAATTGCTGGGACAATGCAAGAACTCTGAGGAAAGGAATTGAGAGAACAGGGAGGTTTGAGATCATCTCCAAGGACATAGGGGTGCCACTTGTGGCCTTCTCCTTGAAAGACAGTAGCCAACACACAGTGTTTGAGATATCAGACCAGCTGAGAAAATTTGGCTGGATAGTTCCAGCCTACACAATGCCACCAGATGCACAGCACATTGCGGTCCTCCGGGTGGTGGTCAGGGAGGATTTCAACCATGGCTTGGCTGAGAGACTTGCTGCAGACATAGACAAGGTTGTGAAGCTTTTAGACACACTTCCTAGCCCCCTCACAACCAAAGCTGCTCATGTCACAGCCATCACCAGTGAGCCTAATGATAAGGTCATGAAGAGTGCAATAGAACTCAGAGAGAGATTGCTGTCTACTGGAAGCGACTTTTGGAGGGGAAAAGACTTGGAGCATGCTAGCCTTTTGGCAACCTTGATGTGGTGTGAGTTAAGGTGGTGA 1539 0.447 MVITSTATHPDEKDEHLSSTFASRYVRQPIPKFKMADSSMPKDVAYQLINDELMLDGAPRLNLASFVTTWMEPECEKLMMASLNKNYVDMDEYPVTTELQNRCVNIIANLFHAPLREEETAVGVGTVGSSEAIMLAGLAFKRKWQTKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTMTGEFEDVKLLSELLTEKNKETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCWDNARTLRKGIERTGRFEIISKDIGVPLVAFSLKDSSQHTVFEISDQLRKFGWIVPAYTMPPDAQHIAVLRVVVREDFNHGLAERLAADIDKVVKLLDTLPSPLTTKAAHVTAITSEPNDKVMKSAIELRERLLSTGSDFWRGKDLEHASLLATLMWCELRW* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01853 512 PANTHER GLUTAMATE DECARBOXYLASE 1 481 IPR010107 GO:0004351|GO:0006536|GO:0030170
Phac4g01853 512 FunFam Glutamate decarboxylase 6 68 - -
Phac4g01853 512 Pfam Pyridoxal-dependent decarboxylase conserved domain 41 384 IPR002129 GO:0016830|GO:0019752|GO:0030170
Phac4g01853 512 SUPERFAMILY PLP-dependent transferases 10 446 IPR015424 -
Phac4g01853 512 Gene3D - 1 68 - -
Phac4g01853 512 Gene3D - 364 451 - -
Phac4g01853 512 FunFam Glutamate decarboxylase 364 451 - -
Phac4g01853 512 Gene3D - 69 363 IPR015421 GO:0003824
Phac4g01853 512 FunFam Glutamate decarboxylase 69 363 - -
Phac4g01853 512 NCBIfam glutamate decarboxylase 19 447 IPR010107 GO:0004351|GO:0006536|GO:0030170
Phac4g01853 512 CDD DOPA_deC_like 62 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01853 Phac-Chr4 45697381 45701836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01853 7 452 Calmodulin-binding Proteins AT3G17760 83.857 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01853 K01580 - gmx:100796475 899.042