Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01848 ATGTGTTACTCACAGATAAATTGTCAAGGAAGCATGGCTAATTTTGAAAACGGTGAGCTACAGAAGATACCAGAAGAAACAGACGCACAACCATATCATGAAACTTTGCATCCTAAATTCCAAAAGATTTTATCCAGGAAACAAAGTGCATCAGTTTCTATTCCCATGGAGTCATATGAGAGAGAAACTAGTCTCGTGGGAGATAGTGGTTCATTATATTCTACACCAGAAATTGATAATCTTATGGAGCATAGTATAGTAGTAACAGGAAACAAAACAGAGGAGATCAAGATAGATGATTTTTCTACTTTCGACAGCACGGTTTCAAAGTACTGGAATAAAAGCTATGATAGCATAAATGAACATTTACTGAGATCTGGGAAACTGGGAGTTTGTAATGATCCTTATTGTACTACTTGTCCTACTTACTTCAAGTCTTCTCAGCTAAGAAATCCAAAAGCTTGTAATATATCTGATCAGAAGTTTCAGAATGCTGGTTATGGGGATGCCAAAGGATTCACTAGAAAACTTTTTTCTCTATGTTCATCTTTTGTTCCTGGAGTTATGAATCCTCACTCTAAATTCATACAACACTGGAACAAGGTTCTTGCCAGTTTTTGCCTGATTGCAATTTTTGTGGATCCATTATTTTTCTTCTTATTCTATGTTCGGCAGGATCATAATTGTATAGTTATCAACTGGAAATTGACAAAAGCACTTGTTATAGTTAGAAGCATGAATGACTTCATATATTTCCTTCACATTCTTCTCCAGTTTAGGTTGGCTTTTGTTTCACCTGAATCGAGGGTGGTTGGTGCTGGAGATTTAGTTGATCATCCAAAGAAAATTGCACTTCATTACCTGAAGGGTTATTTTCTTATTGACTTGTTTGTTGTATTTCCTCTTCCTCAGATAATGTTATTGACTGTTCTACCAAAGTCCTTGAGGGGAGCAAACTATGCTAAGAATGTTCTGCGTGCAGCGATCCTAGTGCAGTATATTCCCAGATTATTCAGATTTCTGCCTATGCTGTTTGGTCAGTCTCCAGCAGGATTCATATTTGAGTCAGCATGGGCAAATTTCATTATAAATCTTCTCATTTTCATGCTAGCTAGCCATGTTGTTGGTTCTACCTGGTACCTATTCGCTCTACAGAGGGTTAATCAATGTTTTCGAAATGCGTGCCATAGTTCTAATATCCCTGGATGCCTGATATTCATTGATTGTGGACATAGCCATGTTGGACACAATCAGCTTGGCTTATCATCAAACCAGTGGAACAACCATGCAGATGCTATTGCATGTTGGAATTCCTCTTCCAGTGGCTCTTTTGCTTATGGGATTTATAACAATGCTGTACCTCTTACTACACAAACAAACATGGTCACCAAATACATATATGCTCTATTTTGGGGATTACAGCAAATCAGTACTCTGGCTGGTAACCAAACACCAAGCAATTTTGTGTTTGAAGCCCTTTTTACTATGGCCATCATAGGATTGGGACTTCTGCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAAGGTCTTGGACGGAGGAGGCTAGAAATGCAACTTAGACGCGGTGATGTTGAGCAATGGATGAGTCATAGACGCTTGCCAGAATACCTCAGAAGGAGAGTACGAGAGGCTGAACGGTATAGTTGGACTGCAACAAGAGGGGTGAATGAAGCAACACTAATGGAGAATTTTCCAGAAGACCTGCAAGTGGATATAAGACGCCATCTCTTCAAATTTGTTAAGAAAGTTCGAATATTTTCTCTGATGGATGAACCTGTCTTAGATGCCATTTGTGCGAGACTAAGACAAACTACTTACATTAAAGGAAGTAGAATTTTGAGTGAAGGTAGTGTGGTAGAGAAGATGGTATTCGTGGTGCGTGGTAAATTGGAGAGCATTGGAGAAGATGGAACTAGAATTCCTTTATCTGAAGGTGATACTTGTGGTGAAGAACTCTTGACATGGTATCTAGAGCATTCTTCTGTCAGCGCAGATGGCAGAAGAGTAAGGCTTCCAGGACAGAAGTTGCTTAGCAACAGAACAGTAAGATGCTTAACAAATGTGGAAGTACTTTCACTGCGAGCACAAAACCTTGAAGAAGTCACAATCCTTTTTACAAGATTCTTGCGCAGTTTGCGTGTTCAAGGAGCCTTAAGGTATGAATCACCCTATTGGAGATCCCTTGCAGCAATCCGCATTCAGTTCAATAAAAAAAAAAAGAAGGAGAATCACCAGGGAAACATGGCTGATTTTGAAAAAGATGAGGTTCCTATGCTGTCAGAAACACGTGCTCAACTATCCGATGAAGTCGTGGATTCTAATTTCCGGAGGCTAGTATCTAGAACACGAAGTGCTTCAATTTCGATTCCTATGACTTCCTTGGAATCATATGAGAAAGAAACTAGTCTTGTGGGACATACTGGTCCACTTCGTAGTGTGAGCAAAACCCCCTTTGTGCAGATGAGTGGTCCATTGTATGCTACTCATGGAACTTCAAATCTTTCAGGACAGAATAGTGCTGCGACAGGAAACAAAGTAGTGGAGAGTAAGACAGAAAAGTTTTCTTCTTTCAATGGCACAAATGAAAATCGTTGGGATAATGACTATGATAGAAAGAATGAACACTTAATGAGGTCTGGGCAGCTGGGAATGTGTAATGATCCTTATTGTACCACTTGCCCCACTTATTTCAAGGCTGCTCAGCCAAGAACTCGAAAAACTTCAGCTATATTTGATCCCAAGTTCCACCATAACTTTTACGGGGATGCTAAGGGTTTTGGAAGAAAATTTTTTTCCTTCTGCTATGCATATGTTCCTGGAGTTATGAATCCTCATGCAAAAGTTGTACAGCGATGGAACAAGATTTTGGCCATTTTTTGCTTGGTGGCAATTTTTGTTGATCCATTATTTTTCTTCTTAATCTATGTGAAGAAGGATGATAAATGTATTGCTATCGATTGGACGATGACAACTACACTTGTTTTTTTTAGAAGCATTAACGATTTCATATATTTCTTTAACATTCTTCTCCAGTTTAGGCTGGCTTATGTTTCTCGTGAGTCAATGGTAGTAGGTGCTGGAGATTTAATTGACCATCCCAAGAAAATTGCTCTTAATTATCTGAAGAGTTATCTTTTTATCGACCTATTTGTCGTATTTCCTCTTCCTCAGATAATGATATTATCTGTCCTACCAAAATACCTGGGATCATCTGGAGCAAATTATGCTAAAAATCTTCTGCGTGCAGCAATCCTTGTGCAGTATTTTCCTAGATTATTCAGATTTCTGCCTCTGCTAATTGGCCAGTCTCCAACAGGATTCATTTTTGAGTCAGCCTGGGCAAATTTCATCATAAATCTTCTCATTTTTATGCTATCTGGCCATGTTGTTGGTTCTTTCTGGTACCTCTTTGGTCTACAGAGGGTTAATCAATGCTTGCGAAATGCCTGCCATGATTCTAAAATGGGTGGATGCTCAACATTTATTGATTGTGGCCGTGATTCTGGGCATAAGTCAGTTACATGGAGCCAAAATGTGAATGCCACTGCTTGTTTGAATTCCACTTCTGGTGCTTTTCAATATGGAGTCTATGTAAATGCTGTACCACTTACTATAGAAACTAGGGTGCAAATCAGTACTCTGGCTGGTAATCAAACCCCAAGCTATTTTGAGTGGGAAGTCCTTTTTACTATGGCCATCATAGGTTTGGGACTCTTACTTTTTGCGCTTCTCATTGGAAACATACAAAACTTTCTTCAGGCTCTTGGACGCAGGAGAGTAAGACAGGCTGAACGGTATAATTGGGCAGCAACAAGGGGAGTAAATGAAGAGATGCTTTTGGAGAATTTGCCAGAAGATCTCCAGACAGACATAAGACGTCATCTCTTCGACTTTGTTAAGAAAGTTCGCATCTTTGCCCTCATGGATGAGCCTATCTTAGATGCAATTTGTGAGAGACTAAAACAAAAGACATACATCAAAGGAAGTAAAGTTTTGAGTCAGGGTTGTCTTGTAGAGAAAATGGTCTTTGTTGTTCGGGGGAAATTGGAGAGCTTTGGAGATGATGGAACTATTGTTCCCTTAACTGAAGGGGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAGCATTCTTCTGTAACAACAGATGGAAAAAAAGTAAGGGTTCAAGGGCAGAGGTTGCTGAGCAATAGGACTGTAAGATGCTTAACAAATGTGGAGGCATTTTCACTTCGTGCTGCAGACCTTGAGGAACTCACAATTCTTTTCACAAGATTCTTGCGGAATCCTCATGTTCAAGGAGCTCTAAGGTATGTATCACCTTATTGGAGATCCCTTGCAGCAAACCGTATTCAGAATCAACAAGGAAACATGGCTAATTTTGAAAAAGATGGGGAGCATAGGCCATCCGAAACACATGCACAACAGAATGAACATTTTAGATTTGGGAAGGTTGTATCAAGGACAAGAAGTGCTTCAATTTCTGTTCCTATGGTCTCTTCCATGGAGCCATATGACAGAGAAACTAGTCTTGTGGGACATTCTGGTCCACTTCCTGGTGTAAGAAAACCCTCCTTAATGCATATGAGTGGGCCACTATATGCTACCAATGGAACTGATAATCCTTTGCATCACACTAAAGTTGTGAAAGGAAACAAAGTAGTGGATAGCAAGGCAGAAAAAATTTGTATTCTTAGCCTGAAAGATGAAAATCATTGCAGTAACAACTATGATAGAAAGAATGAACACTTGGTGAGGTCCAGGCTACTGGGAACATGTAATGATCCTTGTTGTACTACTTGCCCAACTTACTTCAAGGCCTCTATGCAAAGACTTCCAAAATCTTCCACTGTGATTGATCCCCAGTTTCACTTCCACAGTGCTCTTTATGGGGATGCCAAGGGTTTTGGGAGAAAATTTATCTCTTTCTGCACTTCATGTGTTCCTGGAGTTATGAATCCTCACTCAAAAGTTGTACAACATTGGAACAAGCTTTTGGCCATTTTTTGCATGGGAGCAATTTTCGTGGATCCATTATTTTTGTTTCTAATCTATGTACAGAAGGATGACAAATGTATAGCTATCGACTGGGACACAAGAAAAATACTTGTTTTTCTTAGAACATTGAATGATATTGTGTATTTCTTGAACATTCTTCTCCAGTTTAGGCTGGCCTATGTTTCTCCAGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGATCATCCCAAGAAAATTGCACTTCATTATCTGAAGGGTTATTTTCTTTTTGACCTGTTTGTTGTATTTCCTCTTCCTCAGATAATGATATTTTTTGTCCTACCAAGCCGCTTGGGGGCATCTGGAGCAAACTATGCAAAGAATCTTCTGCGTGCAGCTATCCTTGTGCAGTATATTCCCAGATTATTCAGGATCCTGCCTCTGCTAATAGGACAATCTCCAACAGGATTTATATTTGAGTCAGCTTGGGCAAATTTCATCATAAATCTTCTCATTTTCATGCTTGCTAGCCATATTAGGGTTAATCAATGCTTGCGAGATGCTTGTGGAAAGACTCATATTGATAGATGCATGACAGTCATTGACTGTGGAAGACAAGGTTATATCAGAAGCGAGTATTTTGACCAAGCATCAGCTCTATGGAACAACAATACAGATGCCATTGCTTGTTTGAATCCCTCACCCGGTGGTTTCCAATACGGGATCTATGTCAATACTGTACCTCTTACCATGGATATTAGTGTGCCTAACAAATATATTTATTCTCTATTCTGGGGGTTCCAGCAAATTAGTACTCTCGCTGGCAGTTTAACCCCAAGCAGGTTTTGGGGAGAAGTCCTTTTTACAATGGCCATTATAGGATTAGGACTCTTGCTTTTTGCAGTTCTCATTGGAAACATACATAACTTTCTTCAAGGTCTTGGAAGAAGAAGGCTAGAAATGCAACTCAGAGGCCGCGATGTTGAGCAATGGATGAGGCATCGTCGTTTACCAGAAGATCTAAGAAAGAAAATACGAAGGTCTGAACAGTATAATTGGGCTGCAACAAAAGGGGTGAATGAAGAAACAATTCTTGAGAATTTGCCAGAAGATCTCCAGAGGGACATAAGACGTCATCTCTTCAAATTTGTTAAGAAAGTTCGAATTTTCACCCTGATGGATGAGCCTGTCTTGGATGCCGTTTGTGAGAGACTGAGACAGAAGACATACATAAAAGGAAGTATAATTTTGAACCAAGGTTGTATAGTTGAGAAGATGGTCTTTATTGTGCGTGGAAAATTGGAGAGCATTGGAGGAGATGGAGTTGGAGTTCCCTTGTCTGAAGGAGATGTTTGTGGTGAAGAACTTCTGACATGGTATCTTGAAAATTCTTCTTCTGTAAGCACAGATGGTAAAAAAGTAAGGCTTCCAGGGCAGAGGTGGCTTAGCAACAGGACAGTGAAGTGCCTAACAAATGTGGAGGCATTTTCAATCCGAGCTGAAGATCTTGAAGAAGTCACAAGCCGGTATGAATCACCTTACTGGCGATCCTTGGCGGCAATTCGAATTCAGGTTGCATGGAGATACAGGAAGAAACGTAGAAGTCATTCTATCACCTCACAATTAGATCAATCAATGAACTTGTAG 6660 0.3988 MCYSQINCQGSMANFENGELQKIPEETDAQPYHETLHPKFQKILSRKQSASVSIPMESYERETSLVGDSGSLYSTPEIDNLMEHSIVVTGNKTEEIKIDDFSTFDSTVSKYWNKSYDSINEHLLRSGKLGVCNDPYCTTCPTYFKSSQLRNPKACNISDQKFQNAGYGDAKGFTRKLFSLCSSFVPGVMNPHSKFIQHWNKVLASFCLIAIFVDPLFFFLFYVRQDHNCIVINWKLTKALVIVRSMNDFIYFLHILLQFRLAFVSPESRVVGAGDLVDHPKKIALHYLKGYFLIDLFVVFPLPQIMLLTVLPKSLRGANYAKNVLRAAILVQYIPRLFRFLPMLFGQSPAGFIFESAWANFIINLLIFMLASHVVGSTWYLFALQRVNQCFRNACHSSNIPGCLIFIDCGHSHVGHNQLGLSSNQWNNHADAIACWNSSSSGSFAYGIYNNAVPLTTQTNMVTKYIYALFWGLQQISTLAGNQTPSNFVFEALFTMAIIGLGLLLFALLIGNIQNFLQGLGRRRLEMQLRRGDVEQWMSHRRLPEYLRRRVREAERYSWTATRGVNEATLMENFPEDLQVDIRRHLFKFVKKVRIFSLMDEPVLDAICARLRQTTYIKGSRILSEGSVVEKMVFVVRGKLESIGEDGTRIPLSEGDTCGEELLTWYLEHSSVSADGRRVRLPGQKLLSNRTVRCLTNVEVLSLRAQNLEEVTILFTRFLRSLRVQGALRYESPYWRSLAAIRIQFNKKKKKENHQGNMADFEKDEVPMLSETRAQLSDEVVDSNFRRLVSRTRSASISIPMTSLESYEKETSLVGHTGPLRSVSKTPFVQMSGPLYATHGTSNLSGQNSAATGNKVVESKTEKFSSFNGTNENRWDNDYDRKNEHLMRSGQLGMCNDPYCTTCPTYFKAAQPRTRKTSAIFDPKFHHNFYGDAKGFGRKFFSFCYAYVPGVMNPHAKVVQRWNKILAIFCLVAIFVDPLFFFLIYVKKDDKCIAIDWTMTTTLVFFRSINDFIYFFNILLQFRLAYVSRESMVVGAGDLIDHPKKIALNYLKSYLFIDLFVVFPLPQIMILSVLPKYLGSSGANYAKNLLRAAILVQYFPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSFWYLFGLQRVNQCLRNACHDSKMGGCSTFIDCGRDSGHKSVTWSQNVNATACLNSTSGAFQYGVYVNAVPLTIETRVQISTLAGNQTPSYFEWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRVRQAERYNWAATRGVNEEMLLENLPEDLQTDIRRHLFDFVKKVRIFALMDEPILDAICERLKQKTYIKGSKVLSQGCLVEKMVFVVRGKLESFGDDGTIVPLTEGDACGEELLTWYLEHSSVTTDGKKVRVQGQRLLSNRTVRCLTNVEAFSLRAADLEELTILFTRFLRNPHVQGALRYVSPYWRSLAANRIQNQQGNMANFEKDGEHRPSETHAQQNEHFRFGKVVSRTRSASISVPMVSSMEPYDRETSLVGHSGPLPGVRKPSLMHMSGPLYATNGTDNPLHHTKVVKGNKVVDSKAEKICILSLKDENHCSNNYDRKNEHLVRSRLLGTCNDPCCTTCPTYFKASMQRLPKSSTVIDPQFHFHSALYGDAKGFGRKFISFCTSCVPGVMNPHSKVVQHWNKLLAIFCMGAIFVDPLFLFLIYVQKDDKCIAIDWDTRKILVFLRTLNDIVYFLNILLQFRLAYVSPESRVVGAGDLVDHPKKIALHYLKGYFLFDLFVVFPLPQIMIFFVLPSRLGASGANYAKNLLRAAILVQYIPRLFRILPLLIGQSPTGFIFESAWANFIINLLIFMLASHIRVNQCLRDACGKTHIDRCMTVIDCGRQGYIRSEYFDQASALWNNNTDAIACLNPSPGGFQYGIYVNTVPLTMDISVPNKYIYSLFWGFQQISTLAGSLTPSRFWGEVLFTMAIIGLGLLLFAVLIGNIHNFLQGLGRRRLEMQLRGRDVEQWMRHRRLPEDLRKKIRRSEQYNWAATKGVNEETILENLPEDLQRDIRRHLFKFVKKVRIFTLMDEPVLDAVCERLRQKTYIKGSIILNQGCIVEKMVFIVRGKLESIGGDGVGVPLSEGDVCGEELLTWYLENSSSVSTDGKKVRLPGQRWLSNRTVKCLTNVEAFSIRAEDLEEVTSRYESPYWRSLAAIRIQVAWRYRKKRRSHSITSQLDQSMNL* 2220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01848 2219 SUPERFAMILY Voltage-gated potassium channels 957 1267 - -
Phac4g01848 2219 ProSiteProfiles cAMP/cGMP binding motif profile. 2060 2138 IPR000595 -
Phac4g01848 2219 ProSiteProfiles cAMP/cGMP binding motif profile. 1314 1382 IPR000595 -
Phac4g01848 2219 Gene3D Helix hairpin bin 1265 1306 - -
Phac4g01848 2219 Gene3D Helix hairpin bin 522 587 - -
Phac4g01848 2219 Gene3D Helix hairpin bin 1988 2052 - -
Phac4g01848 2219 Gene3D Jelly Rolls 2058 2183 IPR014710 -
Phac4g01848 2219 Gene3D Jelly Rolls 593 717 IPR014710 -
Phac4g01848 2219 Gene3D Jelly Rolls 1312 1436 IPR014710 -
Phac4g01848 2219 CDD CAP_ED 2060 2183 IPR000595 -
Phac4g01848 2219 ProSiteProfiles cAMP/cGMP binding motif profile. 595 663 IPR000595 -
Phac4g01848 2219 Gene3D - 193 519 - -
Phac4g01848 2219 SUPERFAMILY cAMP-binding domain-like 1267 1434 IPR018490 -
Phac4g01848 2219 CDD CAP_ED 1314 1430 IPR000595 -
Phac4g01848 2219 SMART cnmp_10 595 727 IPR000595 -
Phac4g01848 2219 SMART cnmp_10 1314 1432 IPR000595 -
Phac4g01848 2219 SMART cnmp_10 2060 2196 IPR000595 -
Phac4g01848 2219 Pfam Ion transport protein 1675 1985 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac4g01848 2219 Pfam Ion transport protein 201 522 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac4g01848 2219 Pfam Ion transport protein 964 1267 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac4g01848 2219 SUPERFAMILY cAMP-binding domain-like 1988 2182 IPR018490 -
Phac4g01848 2219 SUPERFAMILY cAMP-binding domain-like 523 718 IPR018490 -
Phac4g01848 2219 CDD CAP_ED 595 711 IPR000595 -
Phac4g01848 2219 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 132 786 - -
Phac4g01848 2219 Gene3D - 964 1264 - -
Phac4g01848 2219 SUPERFAMILY Voltage-gated potassium channels 191 523 - -
Phac4g01848 2219 SUPERFAMILY Voltage-gated potassium channels 1665 1988 - -
Phac4g01848 2219 Gene3D - 1674 1984 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01848 Phac-Chr4 45616837 45653777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01848 17 673 Ion Channels AT3G17700 55.735 0.0 701