Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01816 ATGAGTGGTAAAGCCTCCGTCTCCAAGGAACTCCATGCCAAGCACACAAAGATATTAGAGGGACTTGTTAAGCTACCCGACAACAGGGAATGTGCAGATTGCGGGACAAAGGCACCGCGATGGGCAAGTGTGAACTTAGGAATTTTCATATGCATGCAATGTTCAGGAATTCACCGGAGTCTTGGAGTACATATATCAAAGGTGCGATCCACAACTTTGGATACCTGGTTGCCCGATCAAGTTTCTTTTATGCAATTAATGGGTAATGCAAGGTCAAATAAGCACTGGGAGGCAAACTTACCACCAAATTTTGACAGAAATGCTTATGGAATCGAGAGATTTATTCGTTTGAAGTATGTGGAGAAAAGATGGGCTTCAAAAGGAGAAGTTCTACCAACTTCAAAGTCAGCTGAAATAATCTTTAACTCCAATGAGTCACCAGCTGCTGGGGCCAAGACTGTTATTCAGAAGAATAGGAGATTGTCTCTTGAAGAAAGCATTCTTGTGAAACATATGAAACATGTTCCGCCTCCGGTAACAAGATCTCAGGAGCGGCCCTCTGTTCTTCAAAAGAAGGTTTCACCTCCAATATTAAGGAGGCCGTCTGCATCCCTTGATTTTGACAGCTCCAGGTCGAATAACAATGGTACTATGGATCATTTTGGCCTCTTTACGGTCCATGATGCTAAACAGGAAGTCTCAACTACACCTCCTAGTTGGATAACGTTCGATTGA 735 0.4327 MSGKASVSKELHAKHTKILEGLVKLPDNRECADCGTKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQLMGNARSNKHWEANLPPNFDRNAYGIERFIRLKYVEKRWASKGEVLPTSKSAEIIFNSNESPAAGAKTVIQKNRRLSLEESILVKHMKHVPPPVTRSQERPSVLQKKVSPPILRRPSASLDFDSSRSNNNGTMDHFGLFTVHDAKQEVSTTPPSWITFD* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01816 244 FunFam stromal membrane-associated protein 1 isoform X1 1 130 - -
Phac4g01816 244 SUPERFAMILY ArfGap/RecO-like zinc finger 15 126 IPR037278 -
Phac4g01816 244 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Phac4g01816 244 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Phac4g01816 244 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Phac4g01816 244 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 137 IPR001164 GO:0005096
Phac4g01816 244 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 195 IPR044520 GO:0005096
Phac4g01816 244 CDD ArfGap 19 119 - -
Phac4g01816 244 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Phac4g01816 244 MobiDBLite consensus disorder prediction 177 212 - -
Phac4g01816 244 Pfam Putative GTPase activating protein for Arf 17 127 IPR001164 GO:0005096
Phac4g01816 244 SMART arf_gap_3 5 129 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01816 Phac-Chr4 45211249 45215388 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01816 22 119 C2H2 Transcription Factor Family AT4G05330 52.885 2.29e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01816 K12486 - gmx:100802691 417.157