Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01815 ATGCAGATATTAGAGGGACTTGTTAAGCTACCCGACAACAGGGAATGTGCAGATTGCGGGACAAAGGCACCGCGATGGGCAAGTGTGAACTTAGGAATTTTCATATGCATGCAATGTTCAGGAATTCACCGGAGTCTTGGAGTACATATATCAAAGGTGCGATCCACAACTTTGGATACCTGGTTGCCCGATCAAGTTTCTTTTATGCAATTAATGGGTAATGCAAGGTCAAATAAGCACTGGGAGGCAAACTTACCACCAAATTTTGACAGAAATGCTTATGGAATCGAGAGATTTATTCGTTTGAAGTATGTGGAGAAAAGATGGGCTTCAAAAGGAGAAGTTCTACCAACTTCAAAGTCAGCTGAAATAATCTTTAACTCCAATGAGTCACCAGCTGCTGGGGCCAAGACTGTTATTCAGAAGAATAGGAGATTGTCTCTTGAAGAAAGCATTCTTGTGAAACATATGAAACATGTTCCGCCTCCGGTAACAAGATCTCAGGAGCGGCCCTCTGTTCTTCAAAAGAAGGTTTCACCTCCAATATTAAGGAGGCCGTCTGCATCCCTTGATTTTGACAGCTCCAGGTCGAATAACAATGGTACTATGGATCATTTTGGCCTCTTTACGGTCCATGATGCTAAACAGGAAGTCTCAACTACACCTCCTAGTTGGATAACGTTCGATTGA 690 0.4275 MQILEGLVKLPDNRECADCGTKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQLMGNARSNKHWEANLPPNFDRNAYGIERFIRLKYVEKRWASKGEVLPTSKSAEIIFNSNESPAAGAKTVIQKNRRLSLEESILVKHMKHVPPPVTRSQERPSVLQKKVSPPILRRPSASLDFDSSRSNNNGTMDHFGLFTVHDAKQEVSTTPPSWITFD* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01815 229 SMART arf_gap_3 1 114 IPR001164 GO:0005096
Phac4g01815 229 CDD ArfGap 4 104 - -
Phac4g01815 229 MobiDBLite consensus disorder prediction 162 197 - -
Phac4g01815 229 FunFam stromal membrane-associated protein 1 isoform X1 1 115 - -
Phac4g01815 229 SUPERFAMILY ArfGap/RecO-like zinc finger 2 111 IPR037278 -
Phac4g01815 229 PRINTS HIV Rev interacting protein signature 32 49 IPR001164 GO:0005096
Phac4g01815 229 PRINTS HIV Rev interacting protein signature 13 32 IPR001164 GO:0005096
Phac4g01815 229 PRINTS HIV Rev interacting protein signature 53 74 IPR001164 GO:0005096
Phac4g01815 229 ProSiteProfiles ARF GTPase-activating proteins domain profile. 1 122 IPR001164 GO:0005096
Phac4g01815 229 Pfam Putative GTPase activating protein for Arf 3 112 IPR001164 GO:0005096
Phac4g01815 229 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 2 180 IPR044520 GO:0005096
Phac4g01815 229 Gene3D Arf GTPase activating protein 1 115 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01815 Phac-Chr4 45211249 45215388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01815 7 104 C2H2 Transcription Factor Family AT4G05330 52.885 1.86e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01815 K12486 - gmx:100802691 384.8