Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01809 ATGAAAAAGTTGATGAAATGGAAGATGGCTCTGCATCAAGTAGCAAACTTGTTTAGATTTCATATCGAACATGGGGCTGGATATGAATATGAGTTTATTGAGGAGATTGTGGAGTGGGTCTCCAGAAAGATTAATCCTGCTCATTACCCAGTTGGACTAGGGTCACAAGTGCTAGAAGTAATGGAACTTTTGGATGTTGGATGTGATGGTGGTGTCGACATGATAGGGATTCATGGAGTTGGCGGGGTAGGGAAATCAACACTTGCTAAAGAAGTTTATAATTTGATTGCTGACCAGTTTGATGGTTCATGTTTTATTGAAAATGTGAGAGAAAAATCAAACAAGCATGGCTTACAATACCTCCAAAGCATCCTTCTTTCGAAAATACTTGGAGAGAAGGACATCAGGTTAACAAGTGTGCAACAAGGAACTTCAATGATACAACGTAGGCTCCAGCGAAAGAAGGTTCTCTTGATTTTAGATGATGTTGACAGACAGGAGCAATTGCAGGCAGTTGTTGGAAGAGCTGATTGGTTTGGTCCTGGAAGCAGAATCATAATAACAACACGAGATGAACAACTGCTAGCCTCCTATGATGTTCAAAGAACTTATGAGGTGAAGAAATTAAATAAGAATGATGCTCTTGAATTGATTAAATCGAAAGCTTTTAAAATGCATTACTATGATCCAAGGTATGAGGAGCTCTTGAATCGTGCAGTAACATTTGCTTCTGGCATTCCATTAGCTTTGGAAGTAATAGGTTCCAACTTGTATGGAAAAAGTGTAGAAGAATGGAAAGATGTCATCCATCAACTTGAAAAATGTCCTAACAGTCCAGTCCAAGCAATACTTAAAGCAAGCTTAGATTATTTGGAGGAAAAAGAAAGGACTGTTTTTCTTGACATTGCTTGTTGCTTCCAAGGATATGAATTGGCAGAGGTTGAAGATATACTTGAAGCTCATTATGGTCAGAACATGAAGTGTTACATTGATGTATTGGTTGACAAATCTCTAGTAAAGCTTAGTCATGGTACAAAACCTTGTTATAATAGAGTTACATTGCATGACTTGATTGAGGATATGGCTAAAGATATTGTCCGACAGAAATCACTGATAGAGCCAGGTGAGTGTAGGAGATTATGGTTACTGAAAGATGTAAGAGAAGTTTTAAAAAACAACAGGGTGAGTGAAGTTCATGAATGGTTTGATTTAACCTTTTTTATTATCATATTTTCATGTCATAGTTGCTGTGCTTGTATTGTGGTTGGTTCATGCCTTTTGCATTAA 1287 0.3745 MKKLMKWKMALHQVANLFRFHIEHGAGYEYEFIEEIVEWVSRKINPAHYPVGLGSQVLEVMELLDVGCDGGVDMIGIHGVGGVGKSTLAKEVYNLIADQFDGSCFIENVREKSNKHGLQYLQSILLSKILGEKDIRLTSVQQGTSMIQRRLQRKKVLLILDDVDRQEQLQAVVGRADWFGPGSRIIITTRDEQLLASYDVQRTYEVKKLNKNDALELIKSKAFKMHYYDPRYEELLNRAVTFASGIPLALEVIGSNLYGKSVEEWKDVIHQLEKCPNSPVQAILKASLDYLEEKERTVFLDIACCFQGYELAEVEDILEAHYGQNMKCYIDVLVDKSLVKLSHGTKPCYNRVTLHDLIEDMAKDIVRQKSLIEPGECRRLWLLKDVREVLKNNRVSEVHEWFDLTFFIIIFSCHSCCACIVVGSCLLH* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01809 428 Gene3D - 208 292 IPR042197 -
Phac4g01809 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 302 IPR027417 -
Phac4g01809 428 Gene3D - 47 206 IPR027417 -
Phac4g01809 428 Pfam NB-ARC domain 57 291 IPR002182 GO:0043531
Phac4g01809 428 Gene3D - 1 46 IPR035897 -
Phac4g01809 428 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 390 IPR044974 GO:0006952
Phac4g01809 428 PRINTS Disease resistance protein signature 74 89 - -
Phac4g01809 428 PRINTS Disease resistance protein signature 150 164 - -
Phac4g01809 428 PRINTS Disease resistance protein signature 243 257 - -
Phac4g01809 428 SUPERFAMILY "Winged helix" DNA-binding domain 279 391 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01809 Phac-Chr4 45184578 45187273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01809 51 400 WRKY Transcription Factor Family AT5G45050 32.877 8.85e-48 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01809 - - pvu:PHAVU_004G140500g 737.643