Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01808 ATGAAAAAGTTGATGAAATGGAAGATGGCTCTGCATCAAGTAGCAAACTTGTTTAGATTTCATATCGAACATGGGGCTGGATATGAATATGAGTTTATTGAGGAGATTGTGGAGTGGGTCTCCAGAAAGATTAATCCTGCTCATTACCCAGTTGGACTAGGGTCACAAGTGCTAGAAGTAATGGAACTTTTGGATGTTGGATGTGATGGTGGTGTCGACATGATAGGGATTCATGGAGTTGGCGGGGTAGGGAAATCAACACTTGCTAAAGAAGTTTATAATTTGATTGCTGACCAGTTTGATGGTTCATGTTTTATTGAAAATGTGAGAGAAAAATCAAACAAGCATGGCTTACAATACCTCCAAAGCATCCTTCTTTCGAAAATACTTGGAGAGAAGGACATCAGGTTAACAAGTGTGCAACAAGGAACTTCAATGATACAACGTAGGCTCCAGCGAAAGAAGGTTCTCTTGATTTTAGATGATGTTGACAGACAGGAGCAATTGCAGGCAGTTGTTGGAAGAGCTGATTGGTTTGGTCCTGGAAGCAGAATCATAATAACAACACGAGATGAACAACTGCTAGCCTCCTATGATGTTCAAAGAACTTATGAGGTGAAGAAATTAAATAAGAATGATGCTCTTGAATTGATTAAATCGAAAGCTTTTAAAATGCATTACTATGATCCAAGGTATGAGGAGCTCTTGAATCGTGCAGTAACATTTGCTTCTGGCATTCCATTAGCTTTGGAAGTAATAGGTTCCAACTTGTATGGAAAAAGTGTAGAAGAATGGAAAGATGTCATCCATCAACTTGAAAAATGTCCTAACAGTCCAGTCCAAGCAATACTTAAAGCAAGCTTAGATTATTTGGAGGAAAAAGAAAGGACTGTTTTTCTTGACATTGCTTGTTGCTTCCAAGGATATGAATTGGCAGAGGTTGAAGATATACTTGAAGCTCATTATGGTCAGAACATGAAGTGTTACATTGATGTATTGGTTGACAAATCTCTAGTAAAGCTTAGTCATGGTACAAAACCTTGTTATAATAGAGTTACATTGCATGACTTGATTGAGGATATGGCTAAAGATATTGTCCGACAGAAATCACTGATAGAGCCAGGTGAGTGTAGGAGATTATGGTTACTGAAAGATGTAAGAGAAGTTTTAAAAAACAACAGGGGAACTAGCAAAATTGAAATGATATGTCTGGATTTCCCAATATTTGATCAAGAAGAAATAGTAGAATGGGATGGAAATGCCTTCCAGAATATGCAAAACCTCAAAACACTCATTATTAGAAATGGTAACTTTTCTAAAGGTCCAGAATATCTCCCAGATAATTTGAGAGTGCTTGAATGGTGGAGATATCCGTCAAATATTTTACCATCCGATTTTCATCCAAAGGAACTTGCCATATGCAAGTTGCCCTGCAGTAGTATTTCGACAACTGAGTTGACAAACTTAATCAAGAAGTTGGTGAATCTAAGAGTTTTTAAGTTTTCACATGCAAATCTGTAA 1521 0.3728 MKKLMKWKMALHQVANLFRFHIEHGAGYEYEFIEEIVEWVSRKINPAHYPVGLGSQVLEVMELLDVGCDGGVDMIGIHGVGGVGKSTLAKEVYNLIADQFDGSCFIENVREKSNKHGLQYLQSILLSKILGEKDIRLTSVQQGTSMIQRRLQRKKVLLILDDVDRQEQLQAVVGRADWFGPGSRIIITTRDEQLLASYDVQRTYEVKKLNKNDALELIKSKAFKMHYYDPRYEELLNRAVTFASGIPLALEVIGSNLYGKSVEEWKDVIHQLEKCPNSPVQAILKASLDYLEEKERTVFLDIACCFQGYELAEVEDILEAHYGQNMKCYIDVLVDKSLVKLSHGTKPCYNRVTLHDLIEDMAKDIVRQKSLIEPGECRRLWLLKDVREVLKNNRGTSKIEMICLDFPIFDQEEIVEWDGNAFQNMQNLKTLIIRNGNFSKGPEYLPDNLRVLEWWRYPSNILPSDFHPKELAICKLPCSSISTTELTNLIKKLVNLRVFKFSHANL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01808 506 Pfam NB-ARC domain 57 291 IPR002182 GO:0043531
Phac4g01808 506 Gene3D - 1 46 IPR035897 -
Phac4g01808 506 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 504 IPR044974 GO:0006952
Phac4g01808 506 Gene3D Ribonuclease Inhibitor 374 506 IPR032675 -
Phac4g01808 506 Gene3D - 47 206 IPR027417 -
Phac4g01808 506 SUPERFAMILY L domain-like 412 505 - -
Phac4g01808 506 Gene3D - 208 292 IPR042197 -
Phac4g01808 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 302 IPR027417 -
Phac4g01808 506 PRINTS Disease resistance protein signature 423 439 - -
Phac4g01808 506 PRINTS Disease resistance protein signature 243 257 - -
Phac4g01808 506 PRINTS Disease resistance protein signature 150 164 - -
Phac4g01808 506 PRINTS Disease resistance protein signature 74 89 - -
Phac4g01808 506 SUPERFAMILY "Winged helix" DNA-binding domain 279 391 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01808 Phac-Chr4 45184578 45187273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01808 6 479 WRKY Transcription Factor Family AT4G12020 30.943 8.54e-57 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01808 - - pvu:PHAVU_004G140500g 933.71