Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01806 ATGGCAACTACAACTTCCCATGGATTCACCTATGATGTGTTCCTGAGCTTTAGAGGGGAAGACACGCGTTATGGTTTCACTGCCAATCTCTTCAAAGCTCTTTGTGACAAGGGAATTCACACTTTCTTTGATGATGACAAACTTGAAAGCGGAGAAGAAATAACAGCAACACTTGTGAAGGCAATTGAAGAGTCTAGGATTGCCATAGTTGTGCTCTCTCACAACTATGCTTCTTCCTCCTTTTGCTTGGATGAACTCGCTACCATCCTTCACTGCAAGACTAAAGGCCTCTTGGTTATACCCGTCTTTTATAAGGTCGATCCTTCTCATGTAAGACATCAGAAAGGTAGCTATGGAGAAGCACTGGCTAAGCATCAAAAGAGGTTCAAATCCAAGAAGGAAAAGCTGCAGAAATGGAAGGTGGCTCTGCGTCAAGTTGCTGACTTATCTGGCTATCATTTTAAAGATGGAGATGAATACCAGCACAACTTTATTGGGAGAATTGTTGAACGGGTTTCTAGGGTGATTAATCGTGCTCCTTTACATGTTGCGGATCACCCAGTTGGCCTACTGTCGCAAGTGCAAGAGGTGAAGAAACTTTTGGATGTTGGATCTGATGATGTTGTCCACATGATAGGGATCCATGGAATGGGAGGGATAGGAAAAACTACACTTGCTCTAGAAGCGTATAATTTGATTGCTAATGATTTTGATGGCTCATGTTTTCTTCAAAATGTTAGAGAAGAATCAAATAAACATGGGTTAAAACACCTCCAGAGTCTCATTCTTTCCGAAATACTTGGAGAGAAGAACATCAACTTAGCAAGTGTGCAACGAGGAATTTCAGTGATACAACAAAGGCTTCGTAGGAAGAAAGTTCTCTTGATTCTAGATGATGTTGACAATCGAAAGCAGTTACAAGCATTTGCTGGAAGATCCGATTGGTTTGGTCCTGGGAGCAGAGTTATCATTACCACTAGGGACGAACAACTACTAAAATCTCATGAGGTTGGAAGAACTTATGAGATGGAGGAATTGAACGAGAATGATTCTCTTCAATTGCTTATATGGAATGCTTTCAAAAGGGAAAGTTTTCATCCAAGTTTCGAGGATGTCTTGAAAAGTGTAGCAACTTCTGCTTCTGGTCTCCCATTGGCTTTAGAAGTAATAGGTTCCAACTTGGTTGGAAAAAGTGTGGAGGAATGGGAGTCTGCTATTGAACATTACAAAAGAATTCCTAATGGTGAAATCCTAGAGATACTTAAAGTAAGCTTTGATGCTTTGGGGGAAGAAGAAAAAAGTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGAAGTAATCTGACAGAAGTTGAACATATACTTGGTGTTCTTTATGATAACAACATGAAACATCATGTTGGGGTGTTGGTAGAAAAATCTCTCATAAAGGTTTGGCCTAGAAGGCGTATTGAAATGCACGACTTGATTGAGGACATGGGTAGGCAAATTGACCAGCAAGAGTCACCCAAAGAGCCAGGGAAACACAGGAGATTATGGTTACCTAAAGATATCATTCATGTTTTAAAACACAACACATGCAAATTTTTAACACAAATACCTAATATGTCTGGTCTCCCAAATTTGGAGGAAGTTTCATTTAAAAAGTGTCAGAGTTTAGTTGTAGTTCACGACTCAATTGGTTTTATGACTAAACTGAAAATATTGAATGCGGAAGGTTGCAGCAAGCTTTTGAGTTTTCCACCTCTCAACTTGCCCACTCTTGAAAGTCTAAAACTTTCATATTGTTCGAATCTAAAGAAATTTCCAGAAATACTAGGAAAGATGGGAAACGTAAAGGTACTTCAATTGGATAATCTTCCCATAATAGAATTTCCAGTTTCGTTTCAAAACCTTATTCGACTCACACATTTATCCATGTCATGTGAAATTGTTCACTTACCAAGTAGCATTGTCATGATGCGTGAGTTGTTGGTTATTGAAGTTATTAATTGCAAGGAGTGGCGATGGGTAAAATTCGAGGAGGGTGAAGATAACATAGGCTCAATGCTTTCTTCAAAGGTAGATTGGTTTTTGGCCTCGTCTTGCAACTTTGATGATCATTTCTTCTCAGCAGGTTTCATGCAATTGGCACAAGTGCGTAGTTTACATTTAAGGGAAAATAACTTCAAATTCCTTCCTGAATGCATCAAAGAATTTCACAACCTCGAATCACTTAATGTGAGTAATTGCAAGCATCTTCAAGAAATTAGAGGGATTCCACCAAATTTAAAGCATTTCAAGGCAGTAAACTGTATATCATTGAGTTCCTCGAGCTCAAGCATGTTGCTGAATAAGCAACTGCACGAGGCTGGAAAAACTGAATTCTGGTTTCCAGGAACAAGTATTCCAGAGTGGTTTGATCAACAAAGCAGTGGACCTTCAAGTTCTTTCTGGTTTCGTAATAAGTTTCCTGCCAAAGTTCTTTCTTTTCTTATTGCACCTGTGTGTGATGAGTTACGTTTCATTAGACCTATGGTGTTCATTGATGGCAAAGTTCAAGAATCAATATTCTTTTATTCCAAGGAACTAAAGAAGAAGTTTGAATTGGATCACACATTCCTCTTTGATCTACAAGCGCCACATGTTTGTGGTAATTTTTTTAAAGTACCTGTAGGAAAGGAATGGAAGCATGTCGAGGTTACATATGAAGGTGTGATAGAGACCTCAATTATTAAAGCAACAGGAATCCATGTATTCAAAGAGGAAAACAACATCATGGAGGATATTCGGTTTGATGATCCTTATAGTAACAAGAATGTAGACAAAGATCTAAATGTTTCTCAATCACAAAACCATTCCTTGTTACAAAGCATAGAGTGGTTTGATCACCTAAGCAGTGAACCTTCATGTTCTTTCTGGTTTCGTAATAAGTTTCTTGCCAAAGTTCTTTCTCTTCTTATTGCACCTGTGGATGTTGAATATGAGTTTGATTTCATTAGAACTATGGTGTTCATTGATAGCAAAGTTCAAGAATCAATATTATTTTCTTCCAAGGAAATAGGGAGGATGTTTGAATTGGATCAAACATTCTTCTTTGATCTACAAGTGCTACCTGTGTATGGTAATTTGTTCGAACTAGCTTTACGAAAGGAATGGAAGCATGTGGAGGTTACATATGAAGGTGTGATAGAGACCTCAATTATTAAAGCAACAGGAATCCATGTATTCAAAGAGGAAAACAACATCATGAAGGACATTCGGTTTGGTGATCCTTATAGCAACAATAAAGTAGACAAAGATCTAAATGCTTCTCAATGA 3300 0.3818 MATTTSHGFTYDVFLSFRGEDTRYGFTANLFKALCDKGIHTFFDDDKLESGEEITATLVKAIEESRIAIVVLSHNYASSSFCLDELATILHCKTKGLLVIPVFYKVDPSHVRHQKGSYGEALAKHQKRFKSKKEKLQKWKVALRQVADLSGYHFKDGDEYQHNFIGRIVERVSRVINRAPLHVADHPVGLLSQVQEVKKLLDVGSDDVVHMIGIHGMGGIGKTTLALEAYNLIANDFDGSCFLQNVREESNKHGLKHLQSLILSEILGEKNINLASVQRGISVIQQRLRRKKVLLILDDVDNRKQLQAFAGRSDWFGPGSRVIITTRDEQLLKSHEVGRTYEMEELNENDSLQLLIWNAFKRESFHPSFEDVLKSVATSASGLPLALEVIGSNLVGKSVEEWESAIEHYKRIPNGEILEILKVSFDALGEEEKSVFLDIACCFKGSNLTEVEHILGVLYDNNMKHHVGVLVEKSLIKVWPRRRIEMHDLIEDMGRQIDQQESPKEPGKHRRLWLPKDIIHVLKHNTCKFLTQIPNMSGLPNLEEVSFKKCQSLVVVHDSIGFMTKLKILNAEGCSKLLSFPPLNLPTLESLKLSYCSNLKKFPEILGKMGNVKVLQLDNLPIIEFPVSFQNLIRLTHLSMSCEIVHLPSSIVMMRELLVIEVINCKEWRWVKFEEGEDNIGSMLSSKVDWFLASSCNFDDHFFSAGFMQLAQVRSLHLRENNFKFLPECIKEFHNLESLNVSNCKHLQEIRGIPPNLKHFKAVNCISLSSSSSSMLLNKQLHEAGKTEFWFPGTSIPEWFDQQSSGPSSSFWFRNKFPAKVLSFLIAPVCDELRFIRPMVFIDGKVQESIFFYSKELKKKFELDHTFLFDLQAPHVCGNFFKVPVGKEWKHVEVTYEGVIETSIIKATGIHVFKEENNIMEDIRFDDPYSNKNVDKDLNVSQSQNHSLLQSIEWFDHLSSEPSCSFWFRNKFLAKVLSLLIAPVDVEYEFDFIRTMVFIDSKVQESILFSSKEIGRMFELDQTFFFDLQVLPVYGNLFELALRKEWKHVEVTYEGVIETSIIKATGIHVFKEENNIMKDIRFGDPYSNNKVDKDLNASQ* 1100
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01806 1099 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 522 IPR044974 GO:0006952
Phac4g01806 1099 SUPERFAMILY "Winged helix" DNA-binding domain 416 523 IPR036390 -
Phac4g01806 1099 PRINTS Disease resistance protein signature 583 599 - -
Phac4g01806 1099 PRINTS Disease resistance protein signature 380 394 - -
Phac4g01806 1099 PRINTS Disease resistance protein signature 287 301 - -
Phac4g01806 1099 PRINTS Disease resistance protein signature 211 226 - -
Phac4g01806 1099 Gene3D Ribonuclease Inhibitor 602 786 IPR032675 -
Phac4g01806 1099 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 178 - -
Phac4g01806 1099 SMART till_3 10 149 IPR000157 GO:0007165
Phac4g01806 1099 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 152 IPR035897 -
Phac4g01806 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 439 IPR027417 -
Phac4g01806 1099 SUPERFAMILY L domain-like 485 776 - -
Phac4g01806 1099 ProSiteProfiles TIR domain profile. 9 176 IPR000157 GO:0007165
Phac4g01806 1099 Gene3D - 177 338 IPR027417 -
Phac4g01806 1099 Gene3D - 9 176 IPR035897 -
Phac4g01806 1099 Pfam NB-ARC domain 193 411 IPR002182 GO:0043531
Phac4g01806 1099 Gene3D Ribonuclease Inhibitor 519 601 IPR032675 -
Phac4g01806 1099 Gene3D - 345 429 IPR042197 -
Phac4g01806 1099 Pfam TIR domain 11 173 IPR000157 GO:0007165
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac4g01806 Phac-Chr4 45140012 45151228 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01806 514 632 WRKY Transcription Factor Family AT5G45050 34.167 7.74e-07 51.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01806 - - vra:106764825 1036.17