Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01771 ATGACTATACCAATTCAATCTTGTATGCACTTTTCATGTCACATTTTTCTGATTTTTTTGTTCTTCCTTGTGCACACAAGCTCACAATCATTGAATGATCAAGAGCATGCAGTTTTGCTTAAGATAAAGCAATATCTTGAAGACCCTTCTTTCCTCTCCCACTGGAATTCAACTTCCTCTCACTGTTCATGGCCTGAGATCACATGCACCTCTGGCTCAGTCACTTCCCTCACCCTCTCCCATTCCAACATCAACAAAACTATACCACCCTTCATCTGTGACCTCACCAACCTCACACACCTTGACTTCAGCTTCAACTTCATCCCTGGTGACTTCCCCACACCCCTCTACAACTGCTCCAAGTTGGAGTACTTAGATCTTTCGGGTAACAACTTTGATGGCAAGGTTCCTCTTGACATTGACCATTTGAGTGCTAATTTGCAATATCTCAACCTTGGTTCTACCAACTTCCATGGTGGTGTTCCTGCTAGTATTGCAAATTTAAAGCAACTGAGACAGCTTAAACTTCAGTTTTGCTTATTGAATGGCTCTGTTGCTGCTGAGATTGATAGCTTGTCCAATCTTGAGTACTTGGACTTGTCCTCCAACTTCTTGTTTCCTAAATGGAAGTTGCCTTGGAACTTGACCAAGTTCAACAAATTGAAGGTGTTTTATTTGTATGGCACCAACTTGGTTGGGGAAATCCCAGATAACATTGGAGATATGGTGGCTTTGGAGAAGCTGGATGCGTCACAAAATGGCTTAACTGGAGGAATTCCAAGTGGTTTGTTCTTGCTGAAGAATCTGACCTCACTCTATCTTTTTGAAAATGATCTCTCAGGGGAGATACCAAGTGTGGTTGAGGCATTAAACTTGGTCAACCTTGATCTTGCAAGGAACAATCTCACAGGGAAAATACCAGATGATTTTGGAAAGCTGCAACAGTTGTCATGGTTGAGTTTGTCTTTGAATGGCTTGTCAGGTGTGATACCAGAAAGCTTAGGCAATCTTCCAGATCTCAGTGATTTTCGCGTGTTTTTCAACAAGTTATCAGGTACTCTTCCTCCTGATTTTGGCCGTTACTCAAAGCTTAAAACCTTTTTGATTGCATCTAATAGTTTTACTGGGAAGTTACCGGAGAACTTGTGCTATCATGGGATGTTACTTAACTTGTCTGTTTATGAGAATAATCTGAGTGGTGAGTTGCCAGAATTTCTTGGAAATTGCAGTAGTTTACTGGACCTGAAAATTCATGAAAATGAGTTTTCTGGTAACATTCCTAGTGGTCTTTGGACATCTTTCAATTTGTCAAATTTCATGGTGAGCCATAATAAGTTCACTGGTGTGCTTCCTGAAAGGCTATCTTGGAATGTTTCAAGGTTTGAGATAAGTTACAATCAGTTTTCTGGTAAAATTCCAAGTGGAGTATCATCATGGACTAATTTAGTAGTGTTTGATGCCAGTAAGAACAATTTCAATGGAAGTATTCCAAAAGAGCTAACAGCTCTTCCTAAGTTAACAACCTTGTTACTTGATCAGAACCAACTCACTGGGGCACTTCCATCAGATATAATATCATGGAAATCCTTGGTAACTCTAAATTTGAGACAAAACCAACTCTCTGGACAGATTCCTCTTGCAATTGGTCAGTTACCTGTCCTTAGTCAGCTTGATCTATCAGAAAATGAACTCTCTGGCCAAGTTCCTTCTCTACCTCCCAGACTCACCAATCTCAATTTGTCTTATAATAATTTGACTGGGAGGATTCAAAGGGAATATGAAAATTCTGTGTTTGCTAGTAGCTTTTTGGGCAATTCTGGTCTTTGTTCTGACAACCCAGCACTGAACCTCACCTTGTGCAATTCTGGCCTTCAAAGAACAAGCAAGGGCTCATCTTGGTCTATTGGTTCGATTATATGCTTGGCGGTAGTAGCCTTGTTACTGATCCTTCTGGCATCATTCTTGTTTATTAGATTTCAAAGGAAGAGAAAGCACGGATTAGATAACTCTTGGAAGCTCACTTCCTTTCAGAGGGTGAATTTCACAGAATCAACCATTGTATCATCTATGACAGAACAAAACATTATTGGTAGTGGTGGATATGGTACAGTATACCGCATTGATGTTGGTTCAAACTATGTTGCTGTGAAAAAGATTCGGAATAACAGAAAGTTAAACAAGAAGCTTGAGAGCTCCTTCCGTGCAGAAGTTAGAATATTAAGCAACATTCGCCATACCAACATAGTGAAGTTGATGTGTTGTATCTCTAATGAGGATTCTATGCTCCTTGTATATGAGTATCATGAAAATCTCAGCCTAGATAAGTGGCTGCATAAGAATGTTAAGCCAGGTTCAGTCAATAAAGTGGTCCTTGATTGGCCAAAGAGGTTGAAAATAGCAATTGGGATTGCTCAGGGTTTGAGCTACATGCACCATGACTGTTTACCACCTGTTGTTCATAGAGATGTAAAAACAAGCAACATCCTTCTGGATTCTCAATTCAATGCAAAAGTTGCTGATTTTGGACTAGCCAAGTTGTTAATCAAGCCAGAGGAACTTAGCACCATGTCAGCTGTTATTGGCTCATTTGGCTATATTGCTCCAGAATATGTGCAATCAACCAGAGTTAGTGAAAAGATTGATGTGTTCAGCTTTGGGGTGATCCTATTAGAACTGACAACTGGTAAAGAAGCAAGTTATGGAGACCAACACTCATCTCTTTCAGAGTGGGCGTGGCGTCACATTCTGATTGGAGGCAATGTTGAAGAATTGCTAGACAAAGATGTGATTGAAGGCAGTTACTTAGATGAAATGTGCAGTGTTTTCAAACTTGGTGTCATGTGCACTGCAACACTGCCTACTAGTAGGCCTTCCATGAAGGATGCCCTACAAATATTGCAAAGCTTAGGAGAACCATTATTTTATGGTGAGAAGAACTTTGGCCACTACTATGATGCCATTCCCCTTCTTAAGAGTTCAAAGGAAACTAGATTGCATCTTGATAGTGAATGA 3012 0.4021 MTIPIQSCMHFSCHIFLIFLFFLVHTSSQSLNDQEHAVLLKIKQYLEDPSFLSHWNSTSSHCSWPEITCTSGSVTSLTLSHSNINKTIPPFICDLTNLTHLDFSFNFIPGDFPTPLYNCSKLEYLDLSGNNFDGKVPLDIDHLSANLQYLNLGSTNFHGGVPASIANLKQLRQLKLQFCLLNGSVAAEIDSLSNLEYLDLSSNFLFPKWKLPWNLTKFNKLKVFYLYGTNLVGEIPDNIGDMVALEKLDASQNGLTGGIPSGLFLLKNLTSLYLFENDLSGEIPSVVEALNLVNLDLARNNLTGKIPDDFGKLQQLSWLSLSLNGLSGVIPESLGNLPDLSDFRVFFNKLSGTLPPDFGRYSKLKTFLIASNSFTGKLPENLCYHGMLLNLSVYENNLSGELPEFLGNCSSLLDLKIHENEFSGNIPSGLWTSFNLSNFMVSHNKFTGVLPERLSWNVSRFEISYNQFSGKIPSGVSSWTNLVVFDASKNNFNGSIPKELTALPKLTTLLLDQNQLTGALPSDIISWKSLVTLNLRQNQLSGQIPLAIGQLPVLSQLDLSENELSGQVPSLPPRLTNLNLSYNNLTGRIQREYENSVFASSFLGNSGLCSDNPALNLTLCNSGLQRTSKGSSWSIGSIICLAVVALLLILLASFLFIRFQRKRKHGLDNSWKLTSFQRVNFTESTIVSSMTEQNIIGSGGYGTVYRIDVGSNYVAVKKIRNNRKLNKKLESSFRAEVRILSNIRHTNIVKLMCCISNEDSMLLVYEYHENLSLDKWLHKNVKPGSVNKVVLDWPKRLKIAIGIAQGLSYMHHDCLPPVVHRDVKTSNILLDSQFNAKVADFGLAKLLIKPEELSTMSAVIGSFGYIAPEYVQSTRVSEKIDVFSFGVILLELTTGKEASYGDQHSSLSEWAWRHILIGGNVEELLDKDVIEGSYLDEMCSVFKLGVMCTATLPTSRPSMKDALQILQSLGEPLFYGEKNFGHYYDAIPLLKSSKETRLHLDSE* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01771 1003 FunFam Receptor-like protein kinase HSL1 670 767 - -
Phac4g01771 1003 Pfam Leucine Rich Repeat 291 313 IPR001611 GO:0005515
Phac4g01771 1003 Gene3D Ribonuclease Inhibitor 146 208 IPR032675 -
Phac4g01771 1003 Gene3D Transferase(Phosphotransferase) domain 1 769 974 - -
Phac4g01771 1003 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 188 288 - -
Phac4g01771 1003 Pfam Leucine rich repeat 74 132 IPR001611 GO:0005515
Phac4g01771 1003 Pfam Protein kinase domain 692 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01771 1003 SUPERFAMILY Protein kinase-like (PK-like) 680 966 IPR011009 -
Phac4g01771 1003 SUPERFAMILY RNI-like 291 587 - -
Phac4g01771 1003 ProSitePatterns Protein kinases ATP-binding region signature. 696 718 IPR017441 GO:0005524
Phac4g01771 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Phac4g01771 1003 Gene3D Ribonuclease Inhibitor 209 351 IPR032675 -
Phac4g01771 1003 Gene3D Ribonuclease Inhibitor 33 145 IPR032675 -
Phac4g01771 1003 SUPERFAMILY L domain-like 42 375 - -
Phac4g01771 1003 FunFam Receptor-like protein kinase HSL1 isoform A 296 620 - -
Phac4g01771 1003 Gene3D Ribonuclease Inhibitor 352 620 IPR032675 -
Phac4g01771 1003 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Phac4g01771 1003 CDD STKc_IRAK 696 969 - -
Phac4g01771 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 768 979 - -
Phac4g01771 1003 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 392 968 - -
Phac4g01771 1003 ProSiteProfiles Protein kinase domain profile. 690 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01771 1003 SMART serkin_6 690 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01771 1003 Gene3D Phosphorylase Kinase; domain 1 670 767 - -
Phac4g01771 1003 SMART LRR_sd22_2 266 292 - -
Phac4g01771 1003 SMART LRR_sd22_2 192 217 - -
Phac4g01771 1003 SMART LRR_sd22_2 95 127 - -
Phac4g01771 1003 SMART LRR_typ_2 192 218 IPR003591 -
Phac4g01771 1003 SMART LRR_typ_2 503 527 IPR003591 -
Phac4g01771 1003 SMART LRR_typ_2 551 578 IPR003591 -
Phac4g01771 1003 SMART LRR_typ_2 313 336 IPR003591 -
Phac4g01771 1003 SMART LRR_typ_2 242 266 IPR003591 -
Phac4g01771 1003 FunFam Receptor-like protein kinase HSL1 isoform A 32 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01771 Phac-Chr4 44886080 44889758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01771 31 992 Receptor kinase-like Gene Family AT5G25930 51.593 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac4g01771 Pkinase 7.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01771 - - gmx:100813894 1664.05