Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01760 ATGGCAACCCGAAGATATGCTTTTGGAAGGGCTGATGAGGCCACTCATCCAGACTCCATGAGGGCCACTTTGGCTGAATTTGCCTCTACTTTCATCTTTGTCTTTGCTGGAGAAGGCTCTGGCCTTGCTTTGGTTAAGATTTACCAGGATTCAGCTTTCTCAGCTGGTGAACTGTTAGCACTTGCACTTGCCCATGCATTTGCTCTATTTGCTGCTGTTTCTGCTAGCATGCATGTATCAGGTGGCCATGTCAACCCAGCTGTGACATTCGGTGCTCTCATTGGGGGGAGGATCTCTGTGATCCGTGCAGTATACTACTGGATTGCTCAACTTCTGGGTTCTATAGTGGCTGCCTTAGTTCTCAGGCTTGTCACTAATAACATGAGGCCATCAGGGTTCCACGTGTCACCAGGTGTTGGAGTTGGACACATGTTTATACTTGAGATTGTGATGACATTTGGGCTGATGTATACTGTATATGGTACTGCAATAGATCCCAAAAGGGGTGCTGTTAGCAATATTGCACCCTTGGCAATTGGGCTCATTGTTGGTGCAAACATCCTTGTTGGTGGGCCATTTGATGGAGCATGCATGAACCCTGCTCTGGCTTTTGGACCTTCCTTGGTGGGCTGGCAATGGCACCAGCACTGGATCTTCTGGGTGGGTCCACTACTTGGGGCTGCACTGGCTGCACTGGTGTATGAATATGCTGTGATCCCAATTGAACCACCCCCACACCACCACCAACCTTTGGCAACTGAAGATTACTAG 771 0.4903 MATRRYAFGRADEATHPDSMRATLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVTFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEIVMTFGLMYTVYGTAIDPKRGAVSNIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQWHQHWIFWVGPLLGAALAALVYEYAVIPIEPPPHHHQPLATEDY* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01760 256 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Phac4g01760 256 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac4g01760 256 Gene3D Glycerol uptake facilitator protein. 4 242 IPR023271 -
Phac4g01760 256 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac4g01760 256 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac4g01760 256 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac4g01760 256 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac4g01760 256 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac4g01760 256 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac4g01760 256 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac4g01760 256 PANTHER AQUAPORIN-8 6 246 IPR034294 -
Phac4g01760 256 SUPERFAMILY Aquaporin-like 13 249 IPR023271 -
Phac4g01760 256 NCBIfam MIP family channel protein 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac4g01760 256 FunFam Probable aquaporin TIP1-1 4 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01760 Phac-Chr4 44839385 44841274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01760 2 256 Major Intrinsic Protein MIP AT1G73190 70.076 1.89e-121 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01760 K09873 - gmx:100817450 446.817