Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01739 ATGAAACAAAAACCAAAGCATTTGGCAAGTTTCCTTATTATGGCTCAAAAACAAGCACCTTCTTCTTCTTTTATATCAAAATACAGTTATGATGTTTTTCTTAGTTTTCGTGGTGGAGATACCCGTTTTGGTTTCACTGGTAATCTGTACAGTGCTTTGAGTCAAAGGGGAATCTTTACCTTCATCGATGATGAAGCTCTCAGAAAAGGAGAAGCGATCACACCTTTTCTTCGTAAGGCAATCCAAAAATCCAGGATATCCATCATTGTTTTCTCCAAAAACTATGCTTCCTCAACATTTTGTTTGGATGAACTTCTACAAATCATTGAGTGCCACACAAAACAGCACATGTGGATTTTGCCAGTGTTTTATGACGTAGATCCATCAGACGTGCGACATCAAAGAGGGAGTTACCGAGAAGCATTTGCAAAGCATGAAGGTGAAAGATTCAAAGATGACATTGAGAAGGTTCAACAATGGAGGTTGGCTTTGCGTCATGCTGCTGATTTGTCTGGTTTACATTTCAAAACTGGTGAAGAGTATGAGTCTGAGATGACGAGAAAGATCACAGAAGTGATCTCCACTAAGCTTAATCGACCTCCCTTGCATATTGCTGATTATCCTGTTGGTTTGAAAGTTCGGATGCAACAGATAGAAAAACTAATGGGTGGTGAGTTTGATAACAAAGTGACCATGCTTGGGTTTCATGGCATGGGTGGAATAGGAAAATCAACTCTTTCAAGAGCGATATACAACTTGATAGCACATCAATTTGAAGCTTCATACTTTCTTGCTAATGTCAGGGAAAAGTCAATTAAGGATGGCCTGGTGCATATCCAAGAGACAATGCTATCTGAGTTGGTGGGGGAAAAAAATATGAAGTTGGGAGATATTCATCGAGGAATTCCAATACTACAACAAAGACTAAGTGGGAAAAAGGTCCTTCTTGTTCTTGATGATATTAGCAAAAAAGAACAGTTGCATGCAACTGCTGGCGGACTTGATTGGTTTGGCCCTGGTAGCATCATCATTATAACAACCAGGGATAAGCATTTGTTAGATGTTCATGGAGTTGAAAAACAATACAAGGTTGGTGAAATAAAAGATATTGAAGCCCTTGAATTGTTGAAGTGGAATGCTTTCAAGAACAAAGAAGTTGATCCATGTTACAAGGAAGTCACAAAGCGTGCAATGTATTATGCCAACGGCCTTCCACTGGCTTTGGAAACAATAGGATCAAACTTATTTGGTAAAACCTTGGATGAATGGGAATCTGCGTTAGAAGCTTATGAGAGAATTCCAAATAGAGATGTTCAGGAAGTTCTTAGAGTTAGCTATGATAGTTTGGATGCTTTTGAGAAAGAAATATTTCTTGACATAGCTTGCTTCTTCAGAGGATGTTCTCTAGGATATGTTACAAATATGCTTGAGGCAAGAGGTTTTCCTTCAAAATTTGGTATTAGAGTGCTGGAACAAAAATCTCTCATTAAACTTTGCGAATGTGGACATGAAACTGTGACAATGCACGACATGATTCGGTCTATGGGAAAAGAAATAGTTAGAGAACAATCAACTCTGCCCCACAAAAGGAACAGGTTGTGGCTTTACGAGGACATTGTTTGCGTATTGAAGAAAAATATGGAAAATGATAAAGTTGAAGTGATGATGTTGGACATGCCAGAATACCAAGAAATGCAATGCATTCAAAAGTTGCTTGGAAAAATGAAAAACCTACGGATGATTCTTATAAAAAAGGAAGTTGGCTTTCTTAGAAGCCCTACTGCTCTGCCAAACACTTTGAGAGTACTGGAATGGTGGGGATATCCTGCAACTTCTTTACCGTCCAATTTTCATTTGAAGAATCTTGTCATACTCAACTTGTCACACAGTTACTTTGGATGGGACAAACCACTAGAGAATTCAAAGGTTTTGAGACAACTGATTCTCAGAGGTTGTAAGAATATTAGACGAATACCTGACATGTCTGGTTTCCCCAACTTGACAGAACTTCGGGTTGGTGAATGCACAAATCTGATTGAGATTCATGATTCGGTTGGATCTTTACTTAATCTTCAAAAGTTTTGTGCTGAAGGATGTACCAAGCTCACGGTTGGTCCAAGTCGCATAAATTTAATATCCTTGGAGCATCTGTGCCTCCGGGACTGCAGCAGTCTATTTATGTTTCCTGAAGTATCGGCACCAATGCAAAAACTTAAATACGTTAACTTGGAAGGAACTGCCATAAAAAATCTGCCACTTTCAATGCAAAATCTCGAGGGTCTTCAAATGTTGTACCTGGGGAAATGCAATATGCTTGAAATTAATGAATCACCCTATTTCTTTCAAAAGCTGCATATGTTGTTTCCTAATTTGTCAAAATTGTATTTACGAGACTTGGACATTACAATCCTTCCAGCCTGCATTAAAGAATGTAACTCCTTGAAATTTCTGCACGTGACCAACTGCAAGAAGCTTCAAGAAATTAGAGGACTTCCATTAAGCATAAATGAGTTCTCAGCAGCAAACTCTCCTGTTAAAGCCAATTCTTTGACATTAAAAATCAGACAGGCCATTCATTCTGCTGCAATAAGAATCTTTGTTCTTCCAGGTAGGAAAATCCCAATATTGTTTGACCACTCTAGCAGGGGAAATTCTGTAAGTTTTTGGTTTCGTAACGAATTGCCCTCTCTCGCTGTGTGTGCTATTATTGGAGTCTGGGATAATGTGAAGCCTCCTTTTGCTGCCTTTTTTAATTTCTATGTTAAACTAAATGATATTTATAGGTGTGTTTCTTGTTTCCGTTGTGGTAATATAATCTGGAACCCTGAGGTTAGTCACATAATTATACTCAACCGTCAAAATGATTTTCAACATCCATTGAACTCGGATATTCAGAGAGCGCTTCTGACGAATGAGTGGATTCCTGGGAAAATATTATTGAAGATAGAACCAGAAAAAGATCCAAGTAGGTTGGGAAAAATAAAAAAGACCGGAGTTTATGTAAATCGAACATTTAGTAGAGTGGAGGATGTTCGGTTCGAAGATCCTTATGCTCCCAATAAAGCAAGTACTATGGAAAATAAACTTGTGTTGCTAGGTGAGGCACCTGATATACAACAACAGCAGCAACAGTCCTCATCTTTATTCAACCCCACAACCTCATTAGAATCTGCTGTTGGGGAACAACCTTCATACACTGGTGACTCCAATAACCAAGATGGAGAGTTTCTGGATGATCAACCAATTTTAGCTCCAAGTTTTGCGGAGATGCAAAATGGCAAGGCCCAAAAAGAAATGGCAGCACTGATATCAGACGTTTCAAGTGAGTTCACTGCTCAGAGTAGGGAAATTGAGTCCACAGAATCCCAGTCACGTAAAGTTGATGAAGTAGAAGCAGGTTTGGAAACTCAGAACCAGTTCAGAAGTACTATGGTCTTGCAAAATCAAATAGACCAAAGGCTAACTAGGATTAGGAAAATGAAAGAAGATTTAGGAGAGAAACTGAGTGGTATTAAAGCCGACATCTCTGCCATTGAAGCTAACCACTCTTCCATCAAAGCTAACATATCTGCCATTAAAGCTATAATCTCTGCAGACTCAGAGCTACAGCAATTAAAATAG 3621 0.3877 MKQKPKHLASFLIMAQKQAPSSSFISKYSYDVFLSFRGGDTRFGFTGNLYSALSQRGIFTFIDDEALRKGEAITPFLRKAIQKSRISIIVFSKNYASSTFCLDELLQIIECHTKQHMWILPVFYDVDPSDVRHQRGSYREAFAKHEGERFKDDIEKVQQWRLALRHAADLSGLHFKTGEEYESEMTRKITEVISTKLNRPPLHIADYPVGLKVRMQQIEKLMGGEFDNKVTMLGFHGMGGIGKSTLSRAIYNLIAHQFEASYFLANVREKSIKDGLVHIQETMLSELVGEKNMKLGDIHRGIPILQQRLSGKKVLLVLDDISKKEQLHATAGGLDWFGPGSIIIITTRDKHLLDVHGVEKQYKVGEIKDIEALELLKWNAFKNKEVDPCYKEVTKRAMYYANGLPLALETIGSNLFGKTLDEWESALEAYERIPNRDVQEVLRVSYDSLDAFEKEIFLDIACFFRGCSLGYVTNMLEARGFPSKFGIRVLEQKSLIKLCECGHETVTMHDMIRSMGKEIVREQSTLPHKRNRLWLYEDIVCVLKKNMENDKVEVMMLDMPEYQEMQCIQKLLGKMKNLRMILIKKEVGFLRSPTALPNTLRVLEWWGYPATSLPSNFHLKNLVILNLSHSYFGWDKPLENSKVLRQLILRGCKNIRRIPDMSGFPNLTELRVGECTNLIEIHDSVGSLLNLQKFCAEGCTKLTVGPSRINLISLEHLCLRDCSSLFMFPEVSAPMQKLKYVNLEGTAIKNLPLSMQNLEGLQMLYLGKCNMLEINESPYFFQKLHMLFPNLSKLYLRDLDITILPACIKECNSLKFLHVTNCKKLQEIRGLPLSINEFSAANSPVKANSLTLKIRQAIHSAAIRIFVLPGRKIPILFDHSSRGNSVSFWFRNELPSLAVCAIIGVWDNVKPPFAAFFNFYVKLNDIYRCVSCFRCGNIIWNPEVSHIIILNRQNDFQHPLNSDIQRALLTNEWIPGKILLKIEPEKDPSRLGKIKKTGVYVNRTFSRVEDVRFEDPYAPNKASTMENKLVLLGEAPDIQQQQQQSSSLFNPTTSLESAVGEQPSYTGDSNNQDGEFLDDQPILAPSFAEMQNGKAQKEMAALISDVSSEFTAQSREIESTESQSRKVDEVEAGLETQNQFRSTMVLQNQIDQRLTRIRKMKEDLGEKLSGIKADISAIEANHSSIKANISAIKAIISADSELQQLK* 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01739 1206 Pfam TIR domain 30 199 IPR000157 GO:0007165
Phac4g01739 1206 PRINTS Disease resistance protein signature 308 322 - -
Phac4g01739 1206 PRINTS Disease resistance protein signature 232 247 - -
Phac4g01739 1206 PRINTS Disease resistance protein signature 756 772 - -
Phac4g01739 1206 PRINTS Disease resistance protein signature 401 415 - -
Phac4g01739 1206 Gene3D Ribonuclease Inhibitor 709 844 IPR032675 -
Phac4g01739 1206 Gene3D Ribonuclease Inhibitor 555 708 IPR032675 -
Phac4g01739 1206 SMART till_3 29 170 IPR000157 GO:0007165
Phac4g01739 1206 Gene3D - 197 361 IPR027417 -
Phac4g01739 1206 MobiDBLite consensus disorder prediction 1040 1076 - -
Phac4g01739 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 460 IPR027417 -
Phac4g01739 1206 Pfam NB-ARC domain 218 449 IPR002182 GO:0043531
Phac4g01739 1206 FunFam Disease resistance protein (TIR-NBS-LRR class) 26 199 - -
Phac4g01739 1206 MobiDBLite consensus disorder prediction 1040 1078 - -
Phac4g01739 1206 Gene3D - 367 450 IPR042197 -
Phac4g01739 1206 Gene3D - 23 196 IPR035897 -
Phac4g01739 1206 ProSiteProfiles TIR domain profile. 28 197 IPR000157 GO:0007165
Phac4g01739 1206 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 829 IPR044974 GO:0006952
Phac4g01739 1206 SUPERFAMILY L domain-like 508 828 - -
Phac4g01739 1206 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 172 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01739 Phac-Chr4 44600397 44604852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01739 209 881 WRKY Transcription Factor Family AT5G45050 29.091 9.46e-69 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01739 - - var:108320021 1406.35