Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01715 ATGCTGAACAAACCCCTTTTGAATTCTTTGAAGACTGTGATCATGGCTGATTTTCTGACACTGCTTTTTGCTGTTGAAATGATAGTGGTGAGTGGTTTCAGTTTGGGAGCCAGTGGCTTGAACATGAACTACTACTTGTTCAGTTGCCCTTTGGCTGAACTTATTGTTAAGAACACAGTCAACAGAGCTCTGCAAGATGATCCCACGCTAGCAGCAGGGCTTGTTAGAATGCACTTCCATGACTGTTTCATAGAGGGATGTGATGGCTCAGTTCTGATCGACTCCACTAAGGAAAACACAGCAGAAAAAGATTCACCAGCAAATTTGAGCTTGAGGGGCTATGAAGTAATAGATGATATCAAGGAAGAGCTTGAAAAACAATGCCCAGGAGTGGTTTCATGTGCTGACATTCTTGCTATGGCTGCTAGAGATGCAGTTTTCTTCGCAGGGGGTCCTGTGTATGACATACCAAAAGGTAGAAAGGATGGAACAAGGTCCAAAATTGAGGATACTTTCAATCTTCCTGCACCCATTTTCAATGCTTCTCAGCTCATTAAGTTGTTTGGGCAACGTGGGTTTTCTGCAAAAGACATGGTGGCTCTCTCAGGAGCTCACACATTAGGAGTGGCAAGGTGTTCTTCATTCAAGCAGAGACTTACCCCACTGGATCCATCTTTGGACTCACAATTTGCAAAGACACTCTCCAAGACATGCAGTGGTGGTGACACTGCAGAGCAGCCCTTTGACTCCACCAGGAACGATTTCGACAACCTATACTTCAACGCTCTGGTCTCAAACAACGGTGTTCTCACATCAGACCAAACGTTGTACACCACCCCACAAACCAGAAACCTTGTAAACTCTTATGCAATGAACCAAGCCTTGTTCTTCTTGGATTTTCAACAGGCAATGGTGAAGCTGAGCACGCTCGATGTGAAAGAAGGGTCCAAAGGGGAAGTACGAAAAAATTGCCATAAAATAAACTGA 987 0.4438 MLNKPLLNSLKTVIMADFLTLLFAVEMIVVSGFSLGASGLNMNYYLFSCPLAELIVKNTVNRALQDDPTLAAGLVRMHFHDCFIEGCDGSVLIDSTKENTAEKDSPANLSLRGYEVIDDIKEELEKQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTFNLPAPIFNASQLIKLFGQRGFSAKDMVALSGAHTLGVARCSSFKQRLTPLDPSLDSQFAKTLSKTCSGGDTAEQPFDSTRNDFDNLYFNALVSNNGVLTSDQTLYTTPQTRNLVNSYAMNQALFFLDFQQAMVKLSTLDVKEGSKGEVRKNCHKIN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01715 328 CDD secretory_peroxidase 39 327 IPR033905 GO:0004601|GO:0042744
Phac4g01715 328 Pfam Peroxidase 56 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 Gene3D - 43 328 - -
Phac4g01715 328 PANTHER - 21 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 FunFam Peroxidase 175 307 - -
Phac4g01715 328 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Phac4g01715 328 FunFam Peroxidase 43 182 - -
Phac4g01715 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Phac4g01715 328 SUPERFAMILY Heme-dependent peroxidases 39 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 Gene3D Peroxidase, domain 2 175 307 - -
Phac4g01715 328 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac4g01715 328 ProSiteProfiles Plant heme peroxidase family profile. 39 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01715 Phac-Chr4 44282873 44285553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01715 13 328 Peroxidase AT4G33420 72.785 9.36e-173 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01715 K00430 - gmx:100809245 580.867