Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01710 ATGCCTGCCATGAAAAAGAATTCTGAGCAGACTCCTTTTGGATCTGTATTCAACAAGTTGGTGAAGGAGCTTGGAGAACCTGTTGACTTTGAACTTCCAGATTGGTTTAATAAATCGAAGCCAATGCAGTACACCTATATAAAACGCAATATATATCTCACTAAGAAGGTCAAGAGATCCCGGTTTGATGACGATGGAATATTCTGTTCCTGTACTCCTTCAGCTGGATCTACTAGTGTATGTGGTAGAGATTGCCACTGTGGGATGCTTCTGTCTAGCTGTTCATCAGGCTGTAAATGTGGGAGCTCTTGTCTTAACAAACCATTCCAGAATCGCCCTGCGAAAAAGATGAAATTGGTTAAGACTGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCTTGGGGAGTTTGTTATAGAATATGTTGGAGAAGTTATTGATGACAAAACATGTGAGGAAAGGCTTTGGGAAATGAAACATCGTGGGGAAACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATAGATGCAACATATAAGGGAAACAAATCAAGATACATCAACCATAGTTGCTGCCCCAATACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCTACTCGGGACATACAAAAGGGCGAACATCTGACTTACGATTACCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGCTTTGTGTAGGCGCAAATTGGGTGTCCGACCTACCAAGCCTAAAATGTCTTCAGATGCTGCATTAAAATTAGTTACATACCAGGTTTATCAGAATGGACGTTTGCAAATTGGAAGTTCTCGTGTTGACCACCGAAAATGCTTACATAATTGCATTGGTGAAGTTATTAGGATAAAACGCTTTGAAAAGGAGAGGTTTGGAGTCATTAAACGGTTTGATAAATATTCTCGAAAACATTCAATCATGTTTGAGGATGGTCGTGTTGAACTTTATGACATGTCAAAAGAGGACTGGGAACTTGTGAGATAG 1047 0.3983 MPAMKKNSEQTPFGSVFNKLVKELGEPVDFELPDWFNKSKPMQYTYIKRNIYLTKKVKRSRFDDDGIFCSCTPSAGSTSVCGRDCHCGMLLSSCSSGCKCGSSCLNKPFQNRPAKKMKLVKTEKCGSGIVADEDIKLGEFVIEYVGEVIDDKTCEERLWEMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIQKGEHLTYDYQFVQFGADQDCHCGAALCRRKLGVRPTKPKMSSDAALKLVTYQVYQNGRLQIGSSRVDHRKCLHNCIGEVIRIKRFEKERFGVIKRFDKYSRKHSIMFEDGRVELYDMSKEDWELVR* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01710 348 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 37 292 IPR025787 -
Phac4g01710 348 ProSiteProfiles Post-SET domain profile. 238 254 IPR003616 -
Phac4g01710 348 ProSiteProfiles SET domain profile. 115 232 IPR001214 GO:0005515
Phac4g01710 348 Pfam SET domain 126 231 IPR001214 GO:0005515
Phac4g01710 348 SMART PostSET_3 238 254 IPR003616 -
Phac4g01710 348 CDD SET_ASHR3-like 116 254 - -
Phac4g01710 348 FunFam Histone-lysine N-methyltransferase 30 270 - -
Phac4g01710 348 SUPERFAMILY SET domain 27 244 IPR046341 -
Phac4g01710 348 SMART set_7 115 238 IPR001214 GO:0005515
Phac4g01710 348 PANTHER SET DOMAIN PROTEINS 30 274 - -
Phac4g01710 348 ProSiteProfiles AWS domain profile. 64 113 IPR006560 GO:0005634|GO:0042054
Phac4g01710 348 SMART shorttest3 64 114 IPR006560 GO:0005634|GO:0042054
Phac4g01710 348 Gene3D SET domain 33 271 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01710 Phac-Chr4 44251165 44259458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01710 88 253 C2H2 Transcription Factor Family AT2G23740 34.409 1.55e-22 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac4g01710 SET 2.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01710 - - gmx:100808183 670.618