Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01654 ATGGAGGAAAGAGAGATTTTTAGTTCTGGGCAGGCTGTTAAGGTTGTCGAGCCCCCCCAGAGCTTCCACGTGGCACTGAACTCCGTGCAGTTTTCTGGGCCCACGGTGGATTCGCCGGCACCGGTGAATGCTCCGGTGATTACTTCCGGTAGTACAGATGGGAAGAAGAAGAGGGGCCGGCCTAGGAAATATGGACCAGACGGCAATGTGGCGCTGTCGCCGATGCCGATATCGTCGTCGATTCCATTGACCGGAGACTTCTCAGCCTGGAAAAGGGGCAGAGGAAAGCCAGCTGAATCAATCAAGAAGTCTTTCAAGTTTTATGAAGTTGAAGGTCAAGGTGCAGGACCAGGCGATCAAATTGCATACTCAGTTGGTGCCAATTTTACACCTCACATCCTTATAGTAAATGCTGGCGAGGATGTTACTATGAAGATTATGTCCTTCTCTCAGCAAGGATGTCAGGCGATCTGTGTGCTCTCTGCAAACGGCACAATTTCAAATGTTACACTACGCCAACCAACTTCTTCTGGTGGTACTTTAACATATGAGGGACGCTTTGAAATTCTTTCCTTGACTGGTTCATATATGCCGACTGAGAATGGGTTTACAAAGAGCAGATCTGGTGGGATGAGCATCTCTTTGGCCGGGCCTGATGGTCGAGTAATGGGGGGTGGACTGGCTGGTTTGCTGGTAGCTGCTGGTCCTGTGCAGGTTGTTGTGGCTAGTTTTGTTCCTGGTCACCAGCTGGAGCAGAAACCGAAGAAGACAAGGGTGGAGCATGTACCAATGACTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTATACCCGTCAACTCCACTTCTGCTGAAGATATAAGAATTGGTCTTGGTGGAGTAAAGCCAATCTTGACACCAGCTGCTTTTCAAATGGACAGTATCTTTGGCAATGGACAACTTTCTGATGATGAGGCTCCTTTCCCTGAAGATGAGCCTAACACAAGCTATGCAGATGCTGGAGTTGCTAGCTAA 1011 0.5005 MEEREIFSSGQAVKVVEPPQSFHVALNSVQFSGPTVDSPAPVNAPVITSGSTDGKKKRGRPRKYGPDGNVALSPMPISSSIPLTGDFSAWKRGRGKPAESIKKSFKFYEVEGQGAGPGDQIAYSVGANFTPHILIVNAGEDVTMKIMSFSQQGCQAICVLSANGTISNVTLRQPTSSGGTLTYEGRFEILSLTGSYMPTENGFTKSRSGGMSISLAGPDGRVMGGGLAGLLVAAGPVQVVVASFVPGHQLEQKPKKTRVEHVPMTAPAPAPAPAPIPVNSTSAEDIRIGLGGVKPILTPAAFQMDSIFGNGQLSDDEAPFPEDEPNTSYADAGVAS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01654 336 Gene3D - 131 263 - -
Phac4g01654 336 SUPERFAMILY AF0104/ALDC/Ptd012-like 128 251 - -
Phac4g01654 336 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 36 278 IPR039605 GO:0003680
Phac4g01654 336 ProSiteProfiles PPC domain profile profile. 126 265 IPR005175 -
Phac4g01654 336 Pfam Plants and Prokaryotes Conserved (PCC) domain 131 245 IPR005175 -
Phac4g01654 336 MobiDBLite consensus disorder prediction 33 71 - -
Phac4g01654 336 MobiDBLite consensus disorder prediction 310 336 - -
Phac4g01654 336 MobiDBLite consensus disorder prediction 33 50 - -
Phac4g01654 336 CDD DUF296 130 244 IPR005175 -
Phac4g01654 336 FunFam AT-hook motif nuclear-localized protein 1-like 131 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01654 Phac-Chr4 43782678 43788388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01654 38 283 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 54.676 5.40e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01654 - - gmx:102667678 506.523