Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01635 ATGAAAGGTGTGTTGGCTTTTCTTGGCAAGCTCAGAAAGCACTTTCTGTTGCTTCTTGTGGCAATGGAGCTCCTGCTGCTTCTTCTCTCTCCTTTTGCTTCTCCTCTCAGTGATGAAGGACAAGCATTGATGAAGATTAAGGCTTCATTCAGCAATGTAGCAGATGTTCTGCATGATTGGGATGATTTGCATAATGACGACTTCTGTTCCTGGAGAGGAGTCTTGTGTGACAATGTCAGCCTTACTGTTCTTTCTCTAAACTTGTCAAACTTGAACCTTGGTGGGGAGATACCACCGGCCATTGGTGACTTAGGAAACTTGCAATCCATAGACCTGCAGGGGAATAAATTAACTGGTCAAATTCCAGATGAAATTGGGAATTGTGCTGCACTTATTCATCTGGATTTGTCTGATAATCAGTTATATGGTGATATACCCTTCTCCATATCAAAACTAAAGCAGCTTGTGTTCCTGAATTTAAAGAGTAATCAGTTGACTGGTCCTATCCCTTCAATTTTAACCCAAATTCCTAACTTGAAGACTCTCGATCTTGCACGAAATAGACTCACTGGTGAGATTCCAAGGCTACTCTACTGGAATGAAGTCCTGCAGTACCTCGGGTTGCGAGGGAACATGTTGAGTGGAACTCTGTCGCCTGATATCTGTCAATTAACTGGTTTGTGGTATTTTGATGTGAGAGGCAATAACTTGACTGGCACCATACCTGAGAGCATTGGAAACTGTACAAATTTTGAAATATTGGATCTGTCATATAACCAGATTTCTGGGGAGATTCCCTATAATATTGGATTTCTTCAAGTAGCTACTTTGTCACTTCAAGGAAATAGATTAACTGGTAAGATTCCGGAAGTCATTGGTTTAATGCAAGCCCTTGCCATTTTGGATTTGAGTGAGAATGAGCTGATAGGACCCATCCCTCCCATACTAGGCAATCTGTCTTTTACTGGCAAGCTGTACCTTCATGGAAACATGATAACTGGACCAATACCTCCAGAACTTGGCAATATGTCAAGACTAAGCTACCTGCAATTAAATGACAATCAACTAGTTGGCCAAATTCCCAATGAACTTGGGAAGCTCGAACACTTGTTTGAATTGAATCTTGCCAATAATCATCTTGAAGGATCTATTCCACTTAACATTAGCTCCTGTACGGCCTTGAATAAGTTTAATGTGCATGGAAATCATTTAAATGGTTCAATTCCTTTGAGCTTTAGCAGCCTTGAAAGCTTGACTTACTTAAATCTTTCTGCAAACAACTTCAAAGGGATTATACCTGTTGAGTTAGGCCATATAATAAATCTTGATACGTTGGATCTATCTAGCAATAATTTTTCAGGGCATGTTCCAGGGTCTGTTGGTTATCTTGAGCATCTTCTAACCTTGAACTTAAGCCATAACAGTCTTCAGGGTCCCTTGCCTGCTGAATTTGGAAATCTTAGAAGCATACAAATTATTGACATCTCATTCAACCATCTCTTGGGTAGTATGCCTCCAGAAATTGGCCAGCTGCAGAATCTTGTGTCTCTGATTTTAAACAACAATGATTTGCGTGGGAAGATTCCAGATCAGCTTACAAATTGCTTAAGTCTGAACTTCCTGAATGTCTCATATAATAACTTATCCGGGGTCATTCCTCTAATGAAGAACTTCTCACGGTTTTCAGATGACAGCTTCATTGGAAATCCATTATTATGCGGAAATTGGTTAGGATCCATATGTGATCCTTACATACCAAAATCCAGAGTGGTTTTCTCAAGGGCTGCAGTTGTTTGTCTCATAGTTGGTACCATCATATTACTGGCGATGGTAACGGTTGCTCTCTACAGATCAAGCCAATCCATGCAATTGATTAAAGGATCCAGCGGAACTGAGCAAGGGCCACCCAAGCTTGTAATTCTTCATATGGGCCTGGCCATCCATACTTTTGATGATATTATGAGAGTTACCGAGAATCTCAATGAGAAGTATATTGTAGGATATGGTGCCTCAGGTACCGTGTACAAGTGTGTTTTGAAGAATTCCCGGCCAATTGCAATTAAACGGCTATACAACCAGCATCAACACAACTCAAGGGAGTTTGAGACAGAACTTGAAACTATTGGCAGCATCAGACACAGGAATCTTGTCACCTTGCATGGTTATGCTCTAACTCCTAATGGAAATCTTCTTTTCTATGACTATATGGAGAATGGCTCTCTGTGGGATCTTCTTCATGGTCCCTTGAAAAAGGTTAAACTTGATTGGGAAGCACGCTTGAGGATTGCTGTGGGAGCTTCTGAAGGACTTGCTTACCTCCATCATGACTGCAATCCTAGAATTATTCACAGGGATATTAAGTCCTCAAATATCCTGATAGATGAGAACTTTGAAGCTCGCCTGTCTGATTTTGGCATTGCCAAATGTTTATCAACTACAAGAACTCATGCATCAACGTCTGTGCTTGGGACCATAGGCTATATTGACCCGGAGTATGCCCGGAGTTCTAGGTTGAATGAAAAATCCGACGTGTATAGCTTTGGTATTGTTCTACTTGAGCTACTAACTGGGAAGAAAGCAGTGGACAATGATTCCAACTTGCATCACTTGGTAAGTATTTTCTGCATTTTTTTTCTGATGATTCAGTCTTTAATCAAGCAGAATAGTATATTATCTAAGGCAGATAACAACACTATAATGGAGACTGTGGATCCTGAGGTGTCTATTACCTGCATGGATCTGACCCATGTTAAGAAGACCTTTCAGCTTGCTCTTCTTTGCACAAAAGGAAACCCTTCTGAGAGGCCAACTATGCATCAGGTTGCCAGGGTTTTGGCATCACTACTCCCTGCACCTCCCAGCAACATCTTTGCCCCTCCTTCAAAGACCATTGATTATGCACAAATTGTGATTCAAAAGGGAAACAACCTCCATCCCCCACAATTGGAAAGGTTACAATCTCAGAAGTACTCTAATGATCAATGGTTTGTTCGCTTTGAGAATGTTGTATCAAATAACAGCCTATAG 3027 0.409 MKGVLAFLGKLRKHFLLLLVAMELLLLLLSPFASPLSDEGQALMKIKASFSNVADVLHDWDDLHNDDFCSWRGVLCDNVSLTVLSLNLSNLNLGGEIPPAIGDLGNLQSIDLQGNKLTGQIPDEIGNCAALIHLDLSDNQLYGDIPFSISKLKQLVFLNLKSNQLTGPIPSILTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSPDICQLTGLWYFDVRGNNLTGTIPESIGNCTNFEILDLSYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELIGPIPPILGNLSFTGKLYLHGNMITGPIPPELGNMSRLSYLQLNDNQLVGQIPNELGKLEHLFELNLANNHLEGSIPLNISSCTALNKFNVHGNHLNGSIPLSFSSLESLTYLNLSANNFKGIIPVELGHIINLDTLDLSSNNFSGHVPGSVGYLEHLLTLNLSHNSLQGPLPAEFGNLRSIQIIDISFNHLLGSMPPEIGQLQNLVSLILNNNDLRGKIPDQLTNCLSLNFLNVSYNNLSGVIPLMKNFSRFSDDSFIGNPLLCGNWLGSICDPYIPKSRVVFSRAAVVCLIVGTIILLAMVTVALYRSSQSMQLIKGSSGTEQGPPKLVILHMGLAIHTFDDIMRVTENLNEKYIVGYGASGTVYKCVLKNSRPIAIKRLYNQHQHNSREFETELETIGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGPLKKVKLDWEARLRIAVGASEGLAYLHHDCNPRIIHRDIKSSNILIDENFEARLSDFGIAKCLSTTRTHASTSVLGTIGYIDPEYARSSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHHLVSIFCIFFLMIQSLIKQNSILSKADNNTIMETVDPEVSITCMDLTHVKKTFQLALLCTKGNPSERPTMHQVARVLASLLPAPPSNIFAPPSKTIDYAQIVIQKGNNLHPPQLERLQSQKYSNDQWFVRFENVVSNNSL* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01635 1008 SMART serkin_6 660 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01635 1008 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Phac4g01635 1008 SMART LRR_typ_2 224 248 IPR003591 -
Phac4g01635 1008 SMART LRR_typ_2 367 391 IPR003591 -
Phac4g01635 1008 SMART LRR_typ_2 415 438 IPR003591 -
Phac4g01635 1008 SMART LRR_typ_2 176 200 IPR003591 -
Phac4g01635 1008 SMART LRR_typ_2 104 128 IPR003591 -
Phac4g01635 1008 SMART LRR_typ_2 463 486 IPR003591 -
Phac4g01635 1008 SMART LRR_typ_2 511 535 IPR003591 -
Phac4g01635 1008 Pfam Leucine Rich repeat 247 264 IPR001611 GO:0005515
Phac4g01635 1008 Pfam Leucine Rich repeat 177 192 IPR001611 GO:0005515
Phac4g01635 1008 Pfam Leucine rich repeat 441 500 IPR001611 GO:0005515
Phac4g01635 1008 Pfam Leucine rich repeat 106 165 IPR001611 GO:0005515
Phac4g01635 1008 Gene3D Ribonuclease Inhibitor 200 274 IPR032675 -
Phac4g01635 1008 Gene3D Ribonuclease Inhibitor 36 199 IPR032675 -
Phac4g01635 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 201 310 - -
Phac4g01635 1008 ProSitePatterns Protein kinases ATP-binding region signature. 666 688 IPR017441 GO:0005524
Phac4g01635 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 736 955 - -
Phac4g01635 1008 Gene3D Phosphorylase Kinase; domain 1 629 735 - -
Phac4g01635 1008 ProSiteProfiles Leucine-rich repeat profile. 178 200 IPR001611 GO:0005515
Phac4g01635 1008 ProSiteProfiles Protein kinase domain profile. 660 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01635 1008 SUPERFAMILY L domain-like 36 320 - -
Phac4g01635 1008 SUPERFAMILY L domain-like 317 574 - -
Phac4g01635 1008 SUPERFAMILY Protein kinase-like (PK-like) 639 945 IPR011009 -
Phac4g01635 1008 Gene3D Transferase(Phosphotransferase) domain 1 736 953 - -
Phac4g01635 1008 Gene3D Ribonuclease Inhibitor 275 584 IPR032675 -
Phac4g01635 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 311 584 - -
Phac4g01635 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 36 200 - -
Phac4g01635 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Phac4g01635 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 631 735 - -
Phac4g01635 1008 Pfam Protein kinase domain 663 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01635 1008 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 174 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01635 Phac-Chr4 43651145 43659272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01635 272 554 Receptor kinase-like Gene Family AT5G07180 36.482 1.49e-45 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Phac4g01635 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01635 K20718 - gmx:100305433 1761.89