Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01612 ATGAACTTCAAACAATACTGTTGTTTCCTCTTAGATGAAGGGCAAAGCAAAATTCAGATTACTAAGAAGAAGAACAGTAGGGGTTATCCATGGGAAATGTATACCTTGAAGGAGTTGCTTAGAGCAACAAACAACTTTCATCAAGATAATAAGATTGGAGAGGGTGGATTTGGAAGTGTTTATTTTGGTCGAACAAGTAAAGGGGTTCAGATTGCAGTGAAGCGATTGAAGACAATGAGTGCTAAGGCAGAAATGGAGTTTGCAGTGGAAGTGGAAGTATTAGGAAGAGTGAGGCATAAAAATTTGTTGGCATTGAGGGGATTCTATGCAGGAGGAGATGAAAGGTTAATTGTGTATGATTACATGCCTAATCATAGCTTGCTCACACATTTGCATGGTCCACTTGCTAAGGAATGTCAGTTAGATTGGCCAAGAAGAATGAGCATAGCAATTGGAGCTGCTGAAGGTTTAGTGTATTTGCACCATGAGTCAACTCCTCACATCATACATAGAGATATAAAGGCGAGTAATGTTCTTCTAGACTCTGAATTCCAATCTAAGGTTGCTGATTTTGGTTTTGCAAAGCTGGTACCAGATGGTGTGACCCATCTTACCACAAAGGTAAAAGGCACCCTAGGATATTTGGCACCAGAATATGCCATGTGGGGAAAAGTTTCTGAGAGCTGTGATGTTTACAGCTTTGGAATTTTACTGTTGGAGATTATCAGTGCCAAGAAACCCATTGAGAAATTTCCTGGAGGAGTGAAAAGGGACATCGTTCAATGGGCCACACCATATGTCAACAAAGGTCTCTTCAGCAACATTGCAGATCCAAAATTGAAGGGCAAATTTGATTTGCAGCAACTGAAAACTGTGATCACAATAGCTCTTAGATGCACTGATACCAGCGCAGATAAGAGACCTAACATGAAAGAGGTGGTGGATTGGCTCAAGAATGGTGTAGGGAGCACTTAG 975 0.4092 MNFKQYCCFLLDEGQSKIQITKKKNSRGYPWEMYTLKELLRATNNFHQDNKIGEGGFGSVYFGRTSKGVQIAVKRLKTMSAKAEMEFAVEVEVLGRVRHKNLLALRGFYAGGDERLIVYDYMPNHSLLTHLHGPLAKECQLDWPRRMSIAIGAAEGLVYLHHESTPHIIHRDIKASNVLLDSEFQSKVADFGFAKLVPDGVTHLTTKVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKFPGGVKRDIVQWATPYVNKGLFSNIADPKLKGKFDLQQLKTVITIALRCTDTSADKRPNMKEVVDWLKNGVGST* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01612 324 FunFam PTI1-like tyrosine-protein kinase At3g15890 122 324 - -
Phac4g01612 324 SUPERFAMILY Protein kinase-like (PK-like) 28 319 IPR011009 -
Phac4g01612 324 CDD STKc_IRAK 52 319 - -
Phac4g01612 324 PIRSF ILK 12 321 - -
Phac4g01612 324 FunFam PTI1-like tyrosine-protein kinase At3g15890 18 121 - -
Phac4g01612 324 Gene3D Phosphorylase Kinase; domain 1 11 121 - -
Phac4g01612 324 Gene3D Transferase(Phosphotransferase) domain 1 122 321 - -
Phac4g01612 324 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Phac4g01612 324 SMART serkin_6 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01612 324 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 319 - -
Phac4g01612 324 Pfam Protein kinase domain 46 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01612 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Phac4g01612 324 ProSiteProfiles Protein kinase domain profile. 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01612 Phac-Chr4 43431142 43433351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01612 33 313 Trihelix Transcription Factor Family AT1G68690 44.912 6.53e-83 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Phac4g01612 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01612 - - vra:106757402 629.402