Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01592 ATGGCTGTTGCCACGAGCAACAGCAGCAACTTTGAACCTTGTACTTCATACAATTGTTACAAAGTAGCAGGCTTGACTGAGACCATATTAGACACAAGTCAAGTCTATAATCTAAAAGATCGGTACATTCTCGGCGAGCAATTGGGTTGGGGGCAGTTTGGTGTCATAAGGGCCTGTTCTGACAAGTTAACAGGAGAGGTTCTGGCCTGCAAATCAATTGCTAAAGATAGGTTGGTTACTTCGGATGATTTGAGAAGTGTCAAACTTGAGATAGAGATAATGGCTAGGCTATCTGGTCACCCCAATGTTGTGGATCTCAAAGCAGTTTATGAAGAGGAAGGTTTTGTTCACTTGGTGATGGAGCTTTGTGCTGGAGGAGAGCTTTTTCACCGATTAGAGAAGCATGGATGGTTTTCAGAATCTGAAGCAAGGGTTCTCTTCAGGCACCTTATGCAGGTGGTTTTGTATTGTCATGAAAACGGGGTTGTTCATAGAGATTTGAAGCCCGAGAATATTCTCTTAGCAACAAGATCGTCCTCATCTCCTATTAAATTGGCAGATTTTGGACTAGCAACCTACATCAAGCCTGGTCAAAGTTTGCACGGTTTAGTTGGGAGTCCATTCTACATAGCTCCAGAGGTATTAGCTGGTGCTTATAACCAGGCTGCTGATGTGTGGAGTGCAGGTGTAATTCTTTACATTCTGTTGAGTGGGACGCCTCCGTTTTGGGGAAAGACTAAATCCCGGATTTTTGAAGCTGTTAAAGCTGCTTCATTGAAGTTTCCATTGGAACCTTGGGATCGCATTTCTGAATCAGCTAAGGATTTGATCAGGGGAATGCTGTGTACAGACCCTTCTCGAAGACTCACTGCCCAAGAGGTTTTGGATCATTGCTGGATGGAAAGCAACCAAACAAATCCAGAACAACTAAGTGAAAATCAGATCCAAAGTTGCGAAGAATGGGATGTTGGTGGCAGCTCATTCTCAGCTTCTTTCATGTCCAGGAATCAGGACATCAGCTTTGGCGCTGGCACTCCTACTTGCGATGCTCAATCGCCTACTTTCACATGCAGATCATCATTTTCTTCTTTTTTGGAAGAACCAGTCACGCCATGTCTACTATCTGGTGGGTTTTCATTCAAGAGTGTAGGCGATTCATCTGGTTTGGAATTCTCTACTCCTATTCCCTCGATGCTTAGCTTTTCATTCCTCAGCCCCTCTCCTGTTGTTGAACACAAGAGTTGTAAATTAGAGTGTTCAGCTAATATGTCAGATGTAAATGCAATTGCTGGAGAAACTAGCTTGGGAAAGTTACTTTTATTACAGGATTCTCATCTTTGCATTGAACACAATGTTAAAGAAACGAATCGCAAGTCTACAGAGGCTAAAAGGTCAAGTGGAATGAATGGACACAAGGTACTGGGAATCCACAGCAAGAGAAACAGGACAATTGGACTTGGTGAGTGTGAGCAACTTGACCTTGTGGTAACTGAATCAGTCATCCGTTGGTCATCCTGCACTCAACTACCTACATCTTTGAGATCATCTCTTGTTTGCTAG 1560 0.4333 MAVATSNSSNFEPCTSYNCYKVAGLTETILDTSQVYNLKDRYILGEQLGWGQFGVIRACSDKLTGEVLACKSIAKDRLVTSDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEGFVHLVMELCAGGELFHRLEKHGWFSESEARVLFRHLMQVVLYCHENGVVHRDLKPENILLATRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGTPPFWGKTKSRIFEAVKAASLKFPLEPWDRISESAKDLIRGMLCTDPSRRLTAQEVLDHCWMESNQTNPEQLSENQIQSCEEWDVGGSSFSASFMSRNQDISFGAGTPTCDAQSPTFTCRSSFSSFLEEPVTPCLLSGGFSFKSVGDSSGLEFSTPIPSMLSFSFLSPSPVVEHKSCKLECSANMSDVNAIAGETSLGKLLLLQDSHLCIEHNVKETNRKSTEAKRSSGMNGHKVLGIHSKRNRTIGLGECEQLDLVVTESVIRWSSCTQLPTSLRSSLVC* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01592 519 Gene3D Transferase(Phosphotransferase) domain 1 129 329 - -
Phac4g01592 519 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 321 - -
Phac4g01592 519 SUPERFAMILY Protein kinase-like (PK-like) 39 364 IPR011009 -
Phac4g01592 519 Gene3D Phosphorylase Kinase; domain 1 43 128 - -
Phac4g01592 519 FunFam Phosphoenolpyruvate carboxylase kinase 129 316 - -
Phac4g01592 519 Pfam Protein kinase domain 44 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01592 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Phac4g01592 519 ProSiteProfiles Protein kinase domain profile. 42 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01592 519 FunFam Calcium-dependent protein kinase 1 44 127 - -
Phac4g01592 519 ProSitePatterns Protein kinases ATP-binding region signature. 48 75 IPR017441 GO:0005524
Phac4g01592 519 CDD STKc_CAMK 41 299 - -
Phac4g01592 519 SMART serkin_6 42 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01592 Phac-Chr4 42981897 42985650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01592 29 307 EF-hand Containing Proteins AT3G57530 49.821 1.85e-99 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac4g01592 Pkinase 9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01592 - - pvu:PHAVU_004G122500g 933.71