Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01590 ATGGCTTCTGCAACACTCTCTCTGCATTACCCACTTCTTCTTCTTCGTTCTCCTCTTTCAACCAGAATTACCAAACCACCCCCCTCACCCCGACCCCTTCTTCTCCCTCACCCTCTCCACTCGCGATTCCTCCTCCCTCCGCCACGCGCCTACGTCGCCGCGCCCGCATCCGACCACAATTTCGGAGACCCGGATCCGAAGCTGGTCGGGTTGGGTTCAGAGAACGCGAAGCCGCAAAACGTGATCACGTGGAGCCTCCTCTGCACGCTTCTCATGAACCACAAACTGCGCCTGGCTCTCCTGGTCGCAACGCTCTTCGCCTGCTCCACCTGTACCCTATCCATGCCCCTCTTTTCCGGACGGTTTTTTGAAGTTCTAATTGGAGCTAGACCTGAACCGTTATGGAAGCTACTTACTAAAATTGGAGTTCTGTATGCCATGGAGCCACTTTTAACTATTATTTTTGTTATAAACATGAACATTGTGTGGGAGAAAATTATGTCAACACTAAGAGCTCAGATCTTCGGAAGAATATTGATTCAAAAGATTGAATTTTTTGACAAATACAAGGTTGGTGAACTCACAGGTTTGTTAACATCTGATTTGGATTCTCTTAAAAATATTGTCAGCGAGAATGTCTCAAGGGATCGCGGATTCAGAGCATTATCTGAGGTCATTGGAACAATATTCATACTTTTTTCTTTAGCACCGCAACTGGCACCCATTCTAGGTGTTCTGATGCTCGCAGTTTCCATTTCAATTGCTGTCTACAAGAGATCTACATTGCCAGTTTTTAAAGCACATGGGAAGGCCCAAGCATCTATATCTGACTGTGTAACTGAAACGTTTTCAGCTATTAGAACAGTAAGATCCTTTGGTGGTGAAAAGCGCCAAATGTTCTCTTTTGCTAATCAGGTTCTATCTTTCCAATCAAGTGGGATAAAGCTTGGGACTTTCAAATCTGTAAATGAATCCTTGACTAGAGTTGCTGTTTATATTTCTTTAATAGCATTATATTGTCTTGGAGGAAGCAAGGTTAAGGCGGGTGAACTCTCTGTTGGAACCATGGCATCTTTTATCGGATATACTTTCACTTTAACATTCGCTGTTCAAGGACTGGTTAATACTTTTGGAGATCTTCGTGGAAGTTTTGCTGCTGTTGAGAGGATCAACTCTGTTTTTTCTGGAGTTGAAGTTGATGATGCTCTGGCTTATGGCTTAGAAAGAGAACTGAGACAAAAAACAGTGGATGATGAAAACTATAAATTGGTCTTATCTAATATTTCTACTGAGAATAGCCAAAAAAATTTTCACTATATGTCAGCTCTCAAAACATCAAGCAATTTATTTAGCTTAGCTTGGTCCGGAGATATTTGTCTTGAAGATGTATATTTCTCTTATCCATTAAGGCCGGATGTGGAAATCTTACATGGCTTAAATTTAAGACTAAAATGTGGAACTGTAACTGCACTAGTGGGTCCAAGTGGTGCAGGCAAAAGTACAGTAGTCCAGCTATTGTCTCGATTTTATGAGCCAATAAGTGGCTGTATAACAGTTGCAGGAGAGGATGTCCGAACATTTGACAAGAGTGAATGGGCCCAGGTTGTGTCTATTGTAAATCAAGAGCCTGTTTTGTTTTCGGTGTCTGTTGGAGAAAACATTGCATATGGGCTTCCAGATGAAGATGTCTCTAAAGAAGATGTCATTAAGGCAGCAAAAGCTGCAAATGCTCATGACTTTATAATTTCACTTCCACAGGGCTATGATACACTTGTTGGTGAGCGTGGAGGCCTATTGAGTGGAGGACAGAGACAGAGAATTGCTATTGCCCGCGCTCTCCTAAAGAATGCTCCCATCCTTATACTTGATGAGGCAGCGCAGCCTTGTCCTTGA 1893 0.4284 MASATLSLHYPLLLLRSPLSTRITKPPPSPRPLLLPHPLHSRFLLPPPRAYVAAPASDHNFGDPDPKLVGLGSENAKPQNVITWSLLCTLLMNHKLRLALLVATLFACSTCTLSMPLFSGRFFEVLIGARPEPLWKLLTKIGVLYAMEPLLTIIFVINMNIVWEKIMSTLRAQIFGRILIQKIEFFDKYKVGELTGLLTSDLDSLKNIVSENVSRDRGFRALSEVIGTIFILFSLAPQLAPILGVLMLAVSISIAVYKRSTLPVFKAHGKAQASISDCVTETFSAIRTVRSFGGEKRQMFSFANQVLSFQSSGIKLGTFKSVNESLTRVAVYISLIALYCLGGSKVKAGELSVGTMASFIGYTFTLTFAVQGLVNTFGDLRGSFAAVERINSVFSGVEVDDALAYGLERELRQKTVDDENYKLVLSNISTENSQKNFHYMSALKTSSNLFSLAWSGDICLEDVYFSYPLRPDVEILHGLNLRLKCGTVTALVGPSGAGKSTVVQLLSRFYEPISGCITVAGEDVRTFDKSEWAQVVSIVNQEPVLFSVSVGENIAYGLPDEDVSKEDVIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEAAQPCP* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01590 630 Pfam ABC transporter 476 626 IPR003439 GO:0005524
Phac4g01590 630 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 99 382 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01590 630 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 67 625 IPR039421 -
Phac4g01590 630 Pfam ABC transporter transmembrane region 101 369 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac4g01590 630 Gene3D ABC transporter type 1, transmembrane domain 71 396 IPR036640 GO:0005524|GO:0016020
Phac4g01590 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 450 626 IPR027417 -
Phac4g01590 630 ProSitePatterns ABC transporters family signature. 599 613 IPR017871 GO:0005524|GO:0016887
Phac4g01590 630 Gene3D - 454 625 IPR027417 -
Phac4g01590 630 FunFam ABC transporter B family member 28 75 398 - -
Phac4g01590 630 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 458 628 IPR003439 GO:0005524
Phac4g01590 630 SUPERFAMILY ABC transporter transmembrane region 87 390 IPR036640 GO:0005524|GO:0016020
Phac4g01590 630 CDD ABC_6TM_TAP_ABCB8_10_like 105 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01590 Phac-Chr4 42938459 42954210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01590 456 625 Calmodulin-binding Proteins AT2G36910 51.765 4.33e-49 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01590 K05657 - gmx:100791034 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac4g01590 4 42938459 42954210 Phac4g01590 4 42938459 42954210 ECH