Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01587 ATGTTCGGATTCTACCATGTTTCCTCTGAGCACTCCTCTTCTTTGGATTCCTTATCGCCACCTTCCGAGACCTCTCGCCGTGTAGCATTCTCCGACGAGGAGGTTCGGTTGGCTGTCAGGCATCCCAAGAAGAGGGCGGGCCGGAAGAAGTTCCGGGAGACGCGCCACCCCGTGTACCGCGGAGTGAGGAGGAGGAACTCAGACAAATGGGTGTGTGAGGTGAGGGAGCCAAACAAAAAGAGCAGGATTTGGCTAGGGACTTTTCCCACGCCGGAGATGGCGGCGCGGGCACACGATGTGGCGGCGATGGCTCTCAGGGGTCGGTATGCGTGCCTCAACTTTGCCGACTCGAGGTGGCGGCTACCAGCCCCTGCTAGTGCCAGCGCCAAAGATATACAAAAGGCGGCAGCAGAAGCTGCTGAAGCTTTCAGACCAGACCAAACTTTGGAAAACACTAACACAAGGCAAGAGTGCGTGGAGGCGGTGACGAAAACAACGATGGAACAAGGTGTGTTTTATATGGAGGAAGAGCAAGAGTTGGATATGCCTGAGTTGCTGAGGAACATGGTGCTCATGTCCCCATCACATTGCTTAGGGTATGAGTACGAAGATGCTGACCTGGGAGCTCAAGACACTGAGGTGTCACTATGGAGTTTCTCAATCTAA 666 0.545 MFGFYHVSSEHSSSLDSLSPPSETSRRVAFSDEEVRLAVRHPKKRAGRKKFRETRHPVYRGVRRRNSDKWVCEVREPNKKSRIWLGTFPTPEMAARAHDVAAMALRGRYACLNFADSRWRLPAPASASAKDIQKAAAEAAEAFRPDQTLENTNTRQECVEAVTKTTMEQGVFYMEEEQELDMPELLRNMVLMSPSHCLGYEYEDADLGAQDTEVSLWSFSI* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01587 221 MobiDBLite consensus disorder prediction 1 26 - -
Phac4g01587 221 MobiDBLite consensus disorder prediction 7 26 - -
Phac4g01587 221 SMART rav1_2 58 121 IPR001471 GO:0003700|GO:0006355
Phac4g01587 221 FunFam Ethylene-responsive transcription factor 2 57 116 - -
Phac4g01587 221 Pfam AP2 domain 57 107 IPR001471 GO:0003700|GO:0006355
Phac4g01587 221 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 9 218 IPR045277 GO:0003700
Phac4g01587 221 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Phac4g01587 221 PRINTS Ethylene responsive element binding protein signature 81 97 IPR001471 GO:0003700|GO:0006355
Phac4g01587 221 CDD AP2 59 117 IPR001471 GO:0003700|GO:0006355
Phac4g01587 221 Gene3D AP2/ERF domain 58 116 IPR036955 GO:0003700|GO:0006355
Phac4g01587 221 ProSiteProfiles AP2/ERF domain profile. 58 115 IPR001471 GO:0003700|GO:0006355
Phac4g01587 221 SUPERFAMILY DNA-binding domain 58 117 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01587 Phac-Chr4 42916715 42918457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01587 36 219 AP2-EREBP Transcription Factor Family AT5G51990 60.000 3.20e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac4g01587 AP2 8.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01587 - - vra:106763827 352.829