Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01575 ATGCCCCCAATGACACCTTCGCGGGTGACAGGAGGGTTGACCCAATCATCTTCACATTCCGGAATTTTCTTTCAAGGAGATGGGCAGTCACAGAGTGTAGTTAACACTCACTTAAGCTCGTCAATTGTTAACTCGTCTAGCACAGTTACGGGAGCCCGTCGAACAAACCTGGGTCCAGTTTCTGGGGATATGAATAATGCAGTTTTGAACAGTGTTGCAAACTCAGCACCAAGTGTTGGAGCTAGTTCTTTAGTCACAGATGCAAATTCTGCCCTCTCTGGTGGCCCCCATTTGCAGAGAAGTGCCAGTGTTAACACGGACTCATACTTACGATTACCTGCCTCACCCATGTCATTTACATCAAATAATATTAGTATTTCTGGCTCATCAGTGATTGATGGTTCCTCTGTAGTGCAGCAGAGCACTCATCAAGATCAGAATCCTCAACAATTGCAGCAGAACCAGCAGCAGCTGCAGGGTGCTTCAAGTGCTACATCGTTGCCTGCATCTCAAACTGGCCCCTCTTCCCTCCATATGGGTGCACATGTCCCTGGGTCTTTCATTCATGATCCAAATAATGCATCTCAGCTGTCAAAGAAACCTAGACTGGATATCAAACAGGAAGATATAATGCAGCAGCATCAGGTTATACAACAGATTCTTCAGAGACAAGATTCCATGCAATTGCAGGGTCGTAATCCACAGTTACAGGCTTTACTTCAACAACAGCAGAGACTGAGACAACAGCAAATCTTTCAGTCAATGCCCCAATTACAGCGAGTGCACTTGCAGCAACAACAGCAACAGCAACAGCAGCAGCACCAACAACAAATGCAATTGAGGCAGCAATTACAGCAACAAGCGATGCAGCCCTCTTCTGCTGTCAAGCGCCCATGTGACAATGGTGTCAGTGGGGTTTGTGCTCGTCGACTGATGCAGTATCTCTATCATCAAAGGCAACGGCCAAATGATAATAGTATTGCTTATTGGAGAAAATTTGTGGCTGAATATTATTCTCCTCGTGCAAAGAAACGGTGGTGCTTGTCGTTATATAACAATGTTGGGCATCATGCACTTGGTGTTTTCCCCCAAGCAGCTACGGATGCATGGCAATGTGACATATGTGGTTGTAAATCTGGAAGGGGATTTGAGGCAACTTATGAAGTATTACCTAGACTTAATGAAATCAAATTTGGTGGTGGTGTGATTGATGAACTTTTGTTTCTGGACTTGCCACGTGAAATAAGATTTTCTTCTGGTGCGATGATGTTAGAATATGCAAAAGCAGTTCAAGAGAGTGTATATGAGCAGCTTCGAGTTGTTCGTGAAGGTCAACTACGCATCATATTCACTCAAGATTTGAAGATATTATCTTGGGAGTTCTGTGCAAGGCGGCATGAAGAGCTTCTCCCTCGAAGGTTGGTTGCACCACCGGTCAATCAATTAGTACAGGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGAGCAGATGGGGTTTCTCAGCAAGATTTGCAAGCTAACAGCAACATGGTATTGACAGCAGGGCGCCAGCTTGCAAAGATTTTGGAGTTGCAATCACTTAATGACTTGGGTTTTTCTAAAAGATATGTGAGATGTTTGCAGATTTCGGAGGTTGTCAACAGCATGAAAGACCTAATAGATATCTGTGCAGAACACAGAGTTGGGGCAATAGAGTGTTTGAAAAATTATCCTCTACTAACAACAGCCTCAAAGCTCCAGATGCAAAAGATGCAGGAAATGGAGCAGATGGCAAATGTTCATGGTCTGCCAACTGATAGAAACACACTCAATAAGCTGATGGCAATGAATCCTGGATTGAACAACCACATAAACAGTACTCGTAATATGGTTAATCGTGGGACAGCCCATTTAGCTCTTACCAACTACCAGAATGTTCTCTTGAGGCAAAATTCAATGAATTCTAGCCCTGGATCCCTTCAGCGAGAAGGATCCTCATTCAATAATTCTAACCTGAGTCCCTCTTCCACTTTGCAAGGAGCTGGTCCTTCTTTAATTCCAGGCTCAATGCAAAACTCGCCTGTTGGTGGTTTCCCAGGTTCCCATTTACCACCACAGCAACAGCAGCAGCAGCAGCTCCTTCAACAGCCCACATTAGGTGCAAATGGCTTACTGCAACAAAATCATTCACAGGGGTCCCAAGGAAATCAAGCTCTACAGCAGCAGCAGCAGATGATCCACCAACTGGTGCAGGAAATGTCAAATAACAATGGGGGAATGCAATCACAGTCTCTTGGTGGACCCAATGCAAATGGGAATATGGCAAAAAATGCACTGAGTTTTGGGGGCCATACTCCATCCTTAAGTGGAGGTCCTGTCAATGTTCCAGGAAACAATGGACCCATTTCAAGGAATAATAGCTTCAAAACAGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGCAACAATGGATTCAACCCAAGAACATCTGATATGCCACAAAGTCTACATTTGCAAGGTATGGTTCAGGATATTGGCCATGAGTTCGCGGATAGCCCCTTCTTTAACAGTGATCTTGATGATAACATGGGTTTTGGCTGGAAGGCATGA 2595 0.4447 MPPMTPSRVTGGLTQSSSHSGIFFQGDGQSQSVVNTHLSSSIVNSSSTVTGARRTNLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSALSGGPHLQRSASVNTDSYLRLPASPMSFTSNNISISGSSVIDGSSVVQQSTHQDQNPQQLQQNQQQLQGASSATSLPASQTGPSSLHMGAHVPGSFIHDPNNASQLSKKPRLDIKQEDIMQQHQVIQQILQRQDSMQLQGRNPQLQALLQQQQRLRQQQIFQSMPQLQRVHLQQQQQQQQQQHQQQMQLRQQLQQQAMQPSSAVKRPCDNGVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYNNVGHHALGVFPQAATDAWQCDICGCKSGRGFEATYEVLPRLNEIKFGGGVIDELLFLDLPREIRFSSGAMMLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPPVNQLVQVAQKCQSTIAESGADGVSQQDLQANSNMVLTAGRQLAKILELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICAEHRVGAIECLKNYPLLTTASKLQMQKMQEMEQMANVHGLPTDRNTLNKLMAMNPGLNNHINSTRNMVNRGTAHLALTNYQNVLLRQNSMNSSPGSLQREGSSFNNSNLSPSSTLQGAGPSLIPGSMQNSPVGGFPGSHLPPQQQQQQQLLQQPTLGANGLLQQNHSQGSQGNQALQQQQQMIHQLVQEMSNNNGGMQSQSLGGPNANGNMAKNALSFGGHTPSLSGGPVNVPGNNGPISRNNSFKTASNSDSSAAGGNNGFNPRTSDMPQSLHLQGMVQDIGHEFADSPFFNSDLDDNMGFGWKA* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01575 864 MobiDBLite consensus disorder prediction 8 25 - -
Phac4g01575 864 MobiDBLite consensus disorder prediction 646 779 - -
Phac4g01575 864 PANTHER LIM DOMAIN-BINDING PROTEIN 59 848 IPR029005 -
Phac4g01575 864 MobiDBLite consensus disorder prediction 786 828 - -
Phac4g01575 864 Coils Coil 263 287 - -
Phac4g01575 864 MobiDBLite consensus disorder prediction 1 25 - -
Phac4g01575 864 MobiDBLite consensus disorder prediction 135 198 - -
Phac4g01575 864 MobiDBLite consensus disorder prediction 135 177 - -
Phac4g01575 864 MobiDBLite consensus disorder prediction 646 828 - -
Phac4g01575 864 Pfam LIM-domain binding protein 310 570 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01575 Phac-Chr4 42690657 42714765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01575 305 579 C2H2 Transcription Factor Family AT1G43850 60.000 1.20e-106 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01575 - - pvu:PHAVU_004G121400g 1380.93