Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01563 ATGGAAGGTCGTAGTGAAATGGGGCTAATTGGAGAGAGTTTTGATACGAGTAATTTGCTGGGGAGGCTTAGGGATGATGACTATGAAAGTCGGTCAGAAAGTGATAATTTTGATGGTGGATCTGGTGATGATCAAGATGTTGGCGATGATCAACCACAAAGAAAGAAGAAGAAATACCATAGACACACTCCTCAACAAATCCAGGATCTTGAAGCATTCTTTAAGGAGTGTCCTCATCCTGATGAGAAGCAAAGAACTGATCTCAGTAAGAGGCTTGGCTTGGAGAATAAGCAAGTGAAGTTCTGGTTTCAGAATCGACGAACCCAAATGAAAACACAATTGGAAAGGCACGAGAACATGGTTCTTAAGCAGGAGAATGACAAGCTCAGAGCTGAGAATGGTGTGATGAAGGAAGCTTTGGCTAATCCTATATGTAACAACTGTGGTGGTCCAGCCATTCCTGGTCAAATTTCATTGGAGGAGCACCAGACTAGAATTGAAAACGCTCGTCTGAAGGATGAACTGAACCGAATATGTACATTAGCAAACAAGTTCTTGGGCAGGTCCCTCTCATCACTGGCCACTCCTATGTCTCTGCCACCCACAAATTCTGGTCTTGAACTTGCCATTGGAAGAAATGGAATTGGTGGTTCAAGCAATTTTGGCATGCCCATGCCAATTGGGTTTGATGTGGGTGATGGAGCTTTAGGCTCCTCACCTGCAATGCCAAGTATGGCTGCTAGAGTACCAGTGGGAATGATGGGAAACGAAATCCATCTCGAAAGATCTATGCTTATAGATATTGCAATAAATGCTATGGATGAATTAGTTAAGATGGCTCGACAAGATAACCCTCTTTGGATTAAGAGTTCTGATGGTAGGAACGAAGTACTAAACTGTGAGGAATACGCAGGAATATTTCCTACCTTTGTTGGAACAAAACCTGCTGGCTATGTAACTGAAGCTACAAGGGCTACTGGAGTTGTATTAGCCAGCAGTTTAGGCCTTGTGGAAACATTCATGGATGTGGATCGATGGTCAGAGATGTTTTCATCTATGGTGGCTAGTGCTTGCACTTTGGATGTGTTATCTAGTGGCACAAATGGAACGAGAAATGGAGCTTTGCAAGTGATGTTAGCTGAATTTCAACTGCTTTCCCCACTGGTCCCTACTCGTCAATTGAGTTTCCTCAGGTTCTGCAAGCAACATGCTGAAGGTGTATGGGTTGTGGTTGATGTTTCTGTTGATATCATTCGTAATGCTGCCAATTCACATCCATTAATGAGTTGTAAGAGGCTTCCTTCTGGTTGTATCATTCAGGACATGCCCAACAATGGTTTGTCCAAGATTACATGGGTTGAACATTCTCAGTATGATGAGAGTGCGATCCACCAACTTTGTCGTCCATTGGTTAGTTCTGGCATTGGCTTTGGTGCTCAGAGATGGATTGCATCTCTCCTAAGACAGTGTGACTGCTTGGCAATCCTCATGTCCCCTCCTGCTCCATCTGATGACCCTATAGTCCTCAGCCAATCCAATAGGAGAAGCATCATGAAGCTGGCACAACGCATGACTGAGTGCTTCTGCTCAGGGATTTGTGCTTCATCTGCACGCAAGTGGGATGTTCTTCACATTGGTAGTCTGGCTGATGACATGAAAATCATGGCCAGGAAAATTGTGGACGAGCCAAATGAGGCTCCTGGCATTGTATTGAGTGCTTCAACTTCTGTCTGGATGCCCGTTTCCCGACAAAGGGTGTTTGACTTCTTACGTAATGAACAGTTGAGAGGGGAATGGGACATGTTGTCTAAAGGTGGTCCAATGAAGGAGATGCTCCATGTTCCTAAAGGCCAAGAACATGGAAACTGTGTTTCCATCCTTCATTATGCTAATAATGAGAGTAACATGTTTTATCTGCAAGAGTCATGGACTGATGCATCTGGCTCAATGGTTGTATATTCTCCCATCAACATGCAATCTTTGAACATGATGATGAACTGTGGAGATTCATCCGTTGTGGCTCTTCGTCCCTCAGGATTTGCTATTCTGCCAGACGGCCACTCCAACAACAGTGACAACAATGATGGTGGCGGTAGCTGTTTGCTAACAGTTGGATTACAAATGTTGCAGAATGACAACCAATCAGCTAAGTTCACAATGGAGTCAGTTCAAACTGTGAATTCCCTCCTCTCATGCACCATTCAAAAGGTCAAAGAAGCATTAGGAGTTTCATGA 2235 0.4403 MEGRSEMGLIGESFDTSNLLGRLRDDDYESRSESDNFDGGSGDDQDVGDDQPQRKKKKYHRHTPQQIQDLEAFFKECPHPDEKQRTDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENMVLKQENDKLRAENGVMKEALANPICNNCGGPAIPGQISLEEHQTRIENARLKDELNRICTLANKFLGRSLSSLATPMSLPPTNSGLELAIGRNGIGGSSNFGMPMPIGFDVGDGALGSSPAMPSMAARVPVGMMGNEIHLERSMLIDIAINAMDELVKMARQDNPLWIKSSDGRNEVLNCEEYAGIFPTFVGTKPAGYVTEATRATGVVLASSLGLVETFMDVDRWSEMFSSMVASACTLDVLSSGTNGTRNGALQVMLAEFQLLSPLVPTRQLSFLRFCKQHAEGVWVVVDVSVDIIRNAANSHPLMSCKRLPSGCIIQDMPNNGLSKITWVEHSQYDESAIHQLCRPLVSSGIGFGAQRWIASLLRQCDCLAILMSPPAPSDDPIVLSQSNRRSIMKLAQRMTECFCSGICASSARKWDVLHIGSLADDMKIMARKIVDEPNEAPGIVLSASTSVWMPVSRQRVFDFLRNEQLRGEWDMLSKGGPMKEMLHVPKGQEHGNCVSILHYANNESNMFYLQESWTDASGSMVVYSPINMQSLNMMMNCGDSSVVALRPSGFAILPDGHSNNSDNNDGGGSCLLTVGLQMLQNDNQSAKFTMESVQTVNSLLSCTIQKVKEALGVS* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01563 744 Pfam Homeodomain 56 111 IPR001356 GO:0003677
Phac4g01563 744 SUPERFAMILY Bet v1-like 261 492 - -
Phac4g01563 744 MobiDBLite consensus disorder prediction 1 64 - -
Phac4g01563 744 ProSiteProfiles 'Homeobox' domain profile. 53 113 IPR001356 GO:0003677
Phac4g01563 744 ProSiteProfiles START domain profile. 258 495 IPR002913 GO:0008289
Phac4g01563 744 SMART START_1 267 492 IPR002913 GO:0008289
Phac4g01563 744 Pfam START domain 268 491 IPR002913 GO:0008289
Phac4g01563 744 Gene3D - 43 129 - -
Phac4g01563 744 CDD START_ArGLABRA2_like 262 490 - -
Phac4g01563 744 Gene3D - 267 475 IPR023393 -
Phac4g01563 744 SMART HOX_1 55 117 IPR001356 GO:0003677
Phac4g01563 744 Coils Coil 107 127 - -
Phac4g01563 744 SUPERFAMILY Bet v1-like 514 708 - -
Phac4g01563 744 CDD homeodomain 56 113 IPR001356 GO:0003677
Phac4g01563 744 MobiDBLite consensus disorder prediction 19 38 - -
Phac4g01563 744 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 53 741 IPR042160 -
Phac4g01563 744 ProSitePatterns 'Homeobox' domain signature. 88 111 IPR017970 GO:0000981|GO:0006355
Phac4g01563 744 SUPERFAMILY Homeodomain-like 37 113 IPR009057 -
Phac4g01563 744 FunFam Homeobox-leucine zipper protein HDG1 41 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01563 Phac-Chr4 42614543 42619304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01563 1 741 Homeobox Transcription Factor Family AT3G61150 52.949 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac4g01563 START 1e-43 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01563 K09338 - gmx:100784656 1212.98