Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01557 ATGTTCCAAACTGGTCCATTTAAGTGTTGTCTTCCTTCTCATTCTCTTCAACCACTTCCCTTCCACACTCTTATCTTCTTCTCTCTCTTTCTCTCATTTTTTCTCAATGCATTGAATCCCCTCATGGGCTTTCTCCGGCGACTCTTCGGCCCCAAGAAACACAATCCGCCACCCTCCGACGGCCCACCTCCCAAACCCGTCAAGGACAAGAAAACGTGGAACTTCGTAAAGCAGAGTGCGAGGTACAAGTCCACCACGTTGCTCTCACTCAACAACAACAACTTTGACCCTTCCAATTCCTCTGCTCCTTTCTCCGACTCCTTGGACGCCAACAAGCATGCCATCGCCGTCGCGGCGGCTACCGCCGCCGTCGCAGAGGCCGCTCTCGCCGCCGCCCACGCAGCAGCCGAGGTCGTGAGGCTGACCAGCGGCAATGGTCCTGCCGCCGGAAGACCCACCACGGCGTCTCATCCCCGGCAGACGGCTGAGGATACCGCCGCCGCTGTGAGGATTCAGTCGGCGTTCCGAGGATACTTGGCAAGAAGGGCTTTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCATTGGTGAGAGGCCACATAGTGAGAAAGCAAACTACAGATATGCTCAGGCGCATGCAGACTTTGGTGCGACTGCAGTCTCGGGCGCGTGCCACACGTGGGAACTTGTCTGATAATATGCATTCTTTCAAGTCTTCACTTTCTCATTACCCTGTGCCTGAAGATTATCAGCATTCACTTTATGGCTATAGTACAAAATTTGATGGATCTATTCTCAAGAGATGTAGTTCCAACGCAAATTTTAGAGACGTTGACTTGGAGAAAGCCCGGTTTGGTTCCCATTGGCTAGACAATTGGATGGAAGAAAACTCTTGGAGCCAAAATAGAGATGGTTCATTGAAAAATGGGCACCTTGATGATGAGAAGAGTGACAAGATTCTTGAAGTGGATACTTGGAAGCCACATTTGAACTCACACCATAGTAGTGGCAGCTCATTTCAGCCAGCACATCATTATTTGTCTTCTGATTACAACAATGAGAATTTTGTGGCATATGAGTCACCGTCGAAACGTTCTTCAAAAACTCTATATCCAAGTCTCTCTTCAAGGGAGGCTCTACCCTTTGGCTCTCTGAAACTTCACAAAGGAAAAGAAGAAGCATCTTTGAGAAATGTTGAGGATAGTCCTCAAGCATTCTCTGCTTCCTCTGGACTTGGAATTGGTGCAAGGAGAGGTCCATTCACACCAACTAAGAGTGAGTGTGCATGGAGTGTCTTCAGTGGCTATTCTGGTCATCCCAATTACATGTCAAATACTGAATCTTCAAGAGCCAAGGTTAGATCACATAGTGCTCCAAGGCAAAGAATTGAATTTGAGAGATACGGTTCCACAAGAAGGTCTCTTCAGGGTTATTGGGATGCAGGACCTAGTTCAGATAGGGATTCTGATTTTAGAAGCAAGGCCTATTCTACCACAAACAGCAGCTTGAACAGAATTGGGAGTGCCAATTTAAGGTGA 1539 0.4795 MFQTGPFKCCLPSHSLQPLPFHTLIFFSLFLSFFLNALNPLMGFLRRLFGPKKHNPPPSDGPPPKPVKDKKTWNFVKQSARYKSTTLLSLNNNNFDPSNSSAPFSDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGNGPAAGRPTTASHPRQTAEDTAAAVRIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTTDMLRRMQTLVRLQSRARATRGNLSDNMHSFKSSLSHYPVPEDYQHSLYGYSTKFDGSILKRCSSNANFRDVDLEKARFGSHWLDNWMEENSWSQNRDGSLKNGHLDDEKSDKILEVDTWKPHLNSHHSSGSSFQPAHHYLSSDYNNENFVAYESPSKRSSKTLYPSLSSREALPFGSLKLHKGKEEASLRNVEDSPQAFSASSGLGIGARRGPFTPTKSECAWSVFSGYSGHPNYMSNTESSRAKVRSHSAPRQRIEFERYGSTRRSLQGYWDAGPSSDRDSDFRSKAYSTTNSSLNRIGSANLR* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01557 512 ProSiteProfiles IQ motif profile. 188 215 IPR000048 GO:0005515
Phac4g01557 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 209 IPR027417 -
Phac4g01557 512 Gene3D - 163 215 - -
Phac4g01557 512 MobiDBLite consensus disorder prediction 147 161 - -
Phac4g01557 512 MobiDBLite consensus disorder prediction 143 162 - -
Phac4g01557 512 SMART iq_5 186 207 IPR000048 GO:0005515
Phac4g01557 512 SMART iq_5 163 185 IPR000048 GO:0005515
Phac4g01557 512 MobiDBLite consensus disorder prediction 476 512 - -
Phac4g01557 512 Pfam Protein of unknown function (DUF4005) 403 476 IPR025064 -
Phac4g01557 512 ProSiteProfiles IQ motif profile. 164 192 IPR000048 GO:0005515
Phac4g01557 512 MobiDBLite consensus disorder prediction 494 512 - -
Phac4g01557 512 Pfam IQ calmodulin-binding motif 165 185 IPR000048 GO:0005515
Phac4g01557 512 Pfam IQ calmodulin-binding motif 188 205 IPR000048 GO:0005515
Phac4g01557 512 PANTHER IQ-DOMAIN 5-RELATED 71 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01557 Phac-Chr4 42540160 42544850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01557 42 479 IQD Protein Family AT5G62070 45.254 1.36e-60 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01557 - - pvu:PHAVU_004G120200g 883.248