Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01533 ATGTTCTGCTGCTCCTGGTTTTCCATTTCCCCATCACATCTTTTTCCATTTTACATTCAAACAAAACAATCACAACATATCCAAAACACAGAACCCCATACTTTTACCATTTTCCTTTCTTCTTCTACTTATTTAAACATCATTCTCACACAAACCATTTACAAATTTCATTCACAAATTACAACAATGAACACCATAGTGCTCCTCTTCCTCCTCGCATCATCACTTTCTGCAGTGTCCTGCACCTCACGCGCTCTATCCCCTTCACCGGCAACGCCTTATGGCCCGTCCAACGACGACACCGTCAAAGCAACGCTTCTCATGTCAGTCATCATCTTCGTTTCCGGCCTTCTCATCACCGCATTCTGCTCCGTCTCCATCCGCTACTTATCCCTCCAAAACCACACCCTTCCGCAAACCACGATCGGACTCGAACCGCGCGTGCTCGCCGCGTGCCCCGTCATGTCCTACTCCGCACTCAAACTGAACCACCCCAAAGGGCAGCCAAACACCGCAATGCAATGCGCGGTGTGTCTGGCGGACTTCGCCGACGCCGACGCGCTCCGCCTGCTGCTGAAGTGCGGCCACGTGTTTCACACGCGCTGCATCGACGCGTGGCTGGCGGCGCACGTGACGTGTCCGGTGTGCCGCGGCGATATGAGCGCGGAAACGAAAGGGGATGCACGTGCGCGGCACGTGTTCGAGGAGGAAGATTCTGTGAGAGGCTTTGGTGTCCTTGTGAGGTCGCATTCCACGGGTCACTCTTTAGAGGGTTTTTCCATCAAATGTCCTGAGGAAGTGAAGAAGAAGGTTCTAGAAGATGGCGAATGTGGAAATTCCACCACCATGAATCGTTCTGCCAGTTACGACGTCGTTTTGGGGATTGGAGAAGGGGGTGTTGGTAGCACTAATAATAATAATAATAATAATAACAATAACAGGTGGGTTTTGTTGACTTCAATTATGAGAGAAGAGAGAGAGTTTGAAGGAATAACAAGAACATTTTTTGGTTGTGAAGTTTGA 1023 0.4956 MFCCSWFSISPSHLFPFYIQTKQSQHIQNTEPHTFTIFLSSSTYLNIILTQTIYKFHSQITTMNTIVLLFLLASSLSAVSCTSRALSPSPATPYGPSNDDTVKATLLMSVIIFVSGLLITAFCSVSIRYLSLQNHTLPQTTIGLEPRVLAACPVMSYSALKLNHPKGQPNTAMQCAVCLADFADADALRLLLKCGHVFHTRCIDAWLAAHVTCPVCRGDMSAETKGDARARHVFEEEDSVRGFGVLVRSHSTGHSLEGFSIKCPEEVKKKVLEDGECGNSTTMNRSASYDVVLGIGEGGVGSTNNNNNNNNNNRWVLLTSIMREEREFEGITRTFFGCEV* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01533 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 227 IPR013083 -
Phac4g01533 340 SUPERFAMILY RING/U-box 174 221 - -
Phac4g01533 340 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 93 253 - -
Phac4g01533 340 SMART ring_2 175 216 IPR001841 -
Phac4g01533 340 ProSiteProfiles Zinc finger RING-type profile. 175 217 IPR001841 -
Phac4g01533 340 FunFam E3 ubiquitin-protein ligase ATL6 133 223 - -
Phac4g01533 340 Pfam Ring finger domain 174 217 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01533 Phac-Chr4 42161418 42163023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01533 57 317 Rapid Response to Elicitors AT3G05200 28.616 6.01e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01533 K10664 - gmx:102665105 260.766