Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01485 ATGGATTCGAAGCAACTCGATCGTGTGGGTCGAAAGGTTCGGGTCGTCGCCAGGATCCGCGGGTTTTCGGGTCCTAAGGCTAATTCGGAGCCTGGCGCTGCGAGGACTGTGGAGTGGATTTCCGTGAACGGACAAAATTCGGATGATGTCTCTATCTCCTTCAGAGACCATTCTAGTCGTTATTTGGTGGACTATTGCTATAAGGAAGATGAAGACAGTGAAATGATATATTCAAGGGAGGTAAAGCCTCTTGTGTCTGCAGCTTTTGAAGGTCATAACAGTACTGTTATTGCACATGGAGCTAGGGGTAGTGGAAAGACCCACATAATTCAGGGCTCTGCTGAGAGTCCGGGTTTGGCAGTGCTTGCTATAGCTGAGTTCCTTTCCGTTGCTGAGAAAAATGGGAAATCCATATCTGTTTCTTTCTACGAGGTTGATCATCAGGATCGGGCCATGGATTTATTAAATCCAGAGAAGCCGCCAATCTTGGTTTTAGAAGATCGTGGCCGAATTCAGTTTAAAGGACTGACTCAGATTCCTGTCAAATCCGTCACTGAATTTCAGAATTTGTACTCTAGTGCATGTTTTACCCTGAAGGGAGCTCCCAAAAAAGGTGTTCATGGAAGTCATATGGGATTGATTGTGCATGTGTTTTCCCAGAATGAAAGTGTGAGAACTACTGTGAGCAAAATGAATTTTGTTGACTTGGCAGGTTATGAAGATTCCAGAAAGAAGAGTAGTGATGGCTCCGGCCTAATTGAGATTAACAAAATGAACAAGTCAATTTATGCATTATTGAATATTTGTCATGCTTTGAGTACAAATGAAAGTCGTATCCCCTACCGGGAAAGCAAGCTTACACGCATACTACAGGATTCTTTGAGGGGAACTAGCAAAATTTTATTGGTTTCATGCTTGAACCCATCATTTTGCCAAGACACTATTTACATGGTAAGCTTGGCATCACGGTCATGTCATCGGATTCATCATCAGGCATCCTTAGATTCCACCAAGAAAAATGTAAGTTCAGCAAAACAGATGGTGAATTCTCATATGAAACAGATACCTAAAAGTGTTTCTGGGACGGCAAAGAAATTGCATGGTTCTTCTAAACTACTTGAAAAAACTGTTGTTTCTAAGAAGTCTGCAATGAAAGGAAGGAAATTGTTTGATAAAGCTAGCCATTCCGCTGCTAAGGTTGAGAAGGAAATTTCTGTTACTGATATTTCTCAAGCATCAAAGCCTTTGATGGATATCCCATTATGTGAGACTGGAAATCATGTCGTATTCAACTCTGGAATGGAAATGGATGACTCATTTGCAAAAGCTAGTCAGAACATGAAACTTTATCCGATGTTGGAAAATGGTGAGTCATCTTTGAACGGTAGCAGTGAAGTGGAATTCAATCCCCTAGAAGTTAAGGATATTTTGGTGGATGTAGAGGATGGTCAGAAGGAGCATAATACCCCTTGTGTCAGTGATTGCTCAATAATAGTTCAGAAAGACCATAGCTCATCACTCATTAGCTCACCACCCATTAGCTCACAGTTGCGTGATCTTTCTAATAGTCTTAAAATGTTGTGTTCTTCAACTTCGTCGTGCATGCAAATATCCGAAAAGGAACAAGTTGATAGTGTAGAACCAAAAACTCCTACAATTGCTCAAAACAGGAACATTAACCGACTAGATGAAATGAATGGCAAAAGTCCCTGGGAGACATTCAGCATGCGAGGTTCTGGAATGAAGAATTCTATTGTTCAAGAATACCTAAGATTTTTGAACACAGCTGAAAAGAACGAATTAAAAAGATTGAAGGGAATTGGAGAAAAGAGAGCTACCTTCATACTCGAACTTAGAGAAGAATCTGCCGAACCTTTCAAAACTCTGGATGATTTAAAGGATATTGGACTTTCGACCAAACAGATTAAGGGAATGATGAAGAATGAGGTTGGAGAGCTTTTCAATGAACTATAA 1974 0.4068 MDSKQLDRVGRKVRVVARIRGFSGPKANSEPGAARTVEWISVNGQNSDDVSISFRDHSSRYLVDYCYKEDEDSEMIYSREVKPLVSAAFEGHNSTVIAHGARGSGKTHIIQGSAESPGLAVLAIAEFLSVAEKNGKSISVSFYEVDHQDRAMDLLNPEKPPILVLEDRGRIQFKGLTQIPVKSVTEFQNLYSSACFTLKGAPKKGVHGSHMGLIVHVFSQNESVRTTVSKMNFVDLAGYEDSRKKSSDGSGLIEINKMNKSIYALLNICHALSTNESRIPYRESKLTRILQDSLRGTSKILLVSCLNPSFCQDTIYMVSLASRSCHRIHHQASLDSTKKNVSSAKQMVNSHMKQIPKSVSGTAKKLHGSSKLLEKTVVSKKSAMKGRKLFDKASHSAAKVEKEISVTDISQASKPLMDIPLCETGNHVVFNSGMEMDDSFAKASQNMKLYPMLENGESSLNGSSEVEFNPLEVKDILVDVEDGQKEHNTPCVSDCSIIVQKDHSSSLISSPPISSQLRDLSNSLKMLCSSTSSCMQISEKEQVDSVEPKTPTIAQNRNINRLDEMNGKSPWETFSMRGSGMKNSIVQEYLRFLNTAEKNELKRLKGIGEKRATFILELREESAEPFKTLDDLKDIGLSTKQIKGMMKNEVGELFNEL* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01485 657 SMART kinesin_4 10 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac4g01485 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 323 IPR027417 -
Phac4g01485 657 Gene3D - 581 653 - -
Phac4g01485 657 FunFam Kinesin-like protein KIN-10C 1 328 - -
Phac4g01485 657 Pfam Kinesin motor domain 43 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac4g01485 657 Gene3D Kinesin motor domain 9 366 IPR036961 -
Phac4g01485 657 PRINTS Kinesin heavy chain signature 279 300 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac4g01485 657 PRINTS Kinesin heavy chain signature 91 112 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac4g01485 657 PRINTS Kinesin heavy chain signature 230 248 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac4g01485 657 Pfam Helix-hairpin-helix motif 593 635 - -
Phac4g01485 657 PANTHER KINESIN-RELATED 15 513 IPR027640 GO:0003777|GO:0007018
Phac4g01485 657 FunFam Kinesin-like protein KIN-10C 579 653 - -
Phac4g01485 657 ProSiteProfiles Kinesin motor domain profile. 12 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac4g01485 657 SUPERFAMILY RuvA domain 2-like 586 642 IPR010994 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01485 Phac-Chr4 41092517 41098235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01485 61 309 Calmodulin-binding Proteins AT5G65930 31.541 1.66e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01485 K10403 - gmx:100809612 937.176