Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01483 ATGCCAATTGCAAAACTTAAAGCCTCTAGCACTCCAGATGTCATGGATGCAGAAGAGAAAATAGACACTATAATCAGACAGACTATTGCCAGAGAAACTTCCCTTTCTTTCCCAAGTGTCAATGACAACTCTATACATTGGATGCAATTATTCGATGCTTTAGATTCACAAGGTTGGCCTTTGCTTTATCCTATGAAGGTTCAGTTGCAGAATTGTGACAAGTGTTCTCGAGAGTTTTGCTCCCCCATTAACTATAGAAGGCATATTCGTGTACATCATCGGTTGAAAAAGCTTGATAAGGATTTTACACAAACTAGGGATCTTTTAGGAGCATATTGGGATAAGCTCTCTGTAGAAGAGGCAAAGGAAGTTGTATCATTGAAAAATGTGGCGTTGGAGAAAGTTCCGGGTTCTTCAATTTTAAAATCATTGACAACTCTTCTCCAAAACCAAGGATTTTATGCATTTCCTCGGTATTATCTGATGGCTGGTGCTGCCCTTTTGGATATTGTTCAATCTAAATCTTCCAGGTTTCCTATATCTTCCGAAGAGTTGTTCAGCGTTCTTGATGATGCCAGTGAAAAAACATGTTTATGCGGAACAGCAGAATCAGTGAAAAGATATGTATTTGATGGAAATGCGGGAAAAATTGGTCTTGAACCAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAACAAAAATTGGTGATGGCGTGGCTTACTGACAAGGATGCTGAAGCACTTAAGTGTCAGGAGCAATTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAACTGAGATTTTGGAGAGGAAACGCCAGAAGAAGCTTAGACAAAAAGAACAGAAAGCTAGGGAACAAAGACACAAAGCTGAGGCAGAAATTGAAGGCGATATTGACAGTACTGTAAAGGCTTTATCACTGACAGAAGCATCTTCAGATACGTACAATTTTGAAGCTCGTAATCCAAATGCATTTTCAGATAACGTAGCTTCACCTGTACTTCTCCAACATCTTGACACCAATGAGGAAATAAATGGGGATACTCATTCAGAGTATGATACTATCGCTGATCAGAATCTGGAGAGATGGTCTGCACATGAGCATATGGGCAAATGGGCTGAAGCTAATGATTTGCATACAAATCAGATTTCTCCTCTGTCAAAACTTGAAGTCAATCAGAAATATGAAGGCAACCATGATAACAAGGCATCAGCTATTGTCAGTGGTAGTAAAGTATGGAGTCCAAAGTCTGAAGAAGAAATTGACAAGGTGGTTTTAAAAACCACAAAAGAGAAAGAACCGGACCAACTTAAGAATCAAGAAGTTTTGATAGGATCTATATCTGTTAATCTTGACGACGATTGCAGACAATCAGAGGGTAATATGTTGGCTTCTGAAAGGGACTCTATGGTTGAGAATGTGGGCAAGCAGAATAGTCCTCGGGATAAGCTAATGAAAACTGATCGTGTCACGAGTGGCAACAGTCTCTCAATAGTTAAGGTTTGGAGGCCAGTCAGCCGGCTTGAAACGGAAGATCAAGTTCCAGTTCAAAGCGGTGAGACAGATGATGATGATTCAGTTCATGGAAATGTTCGAAATTGGTCAGTTCCAAGTTGTTTAAGGGAGGGTAGTACAGATGGTGATGATATTGGTTTTGAAAAACATTTCTCCCATCCAGAGGGTAGAGCGTATCCTGGTAGCTTCCAGTTCTCCATCCAGGATGCAAAAGCTTTCCTTGCAAAAAGATGGGAAGAAGCTATTTCATCAGATCATGTCACATTGCATCTTACCTCTGACTCAGAATCTTCTGGGTCCCAAGAGACAGATGATTCTATAACAGCAGCGAGTCAATCTTACGATGACGATAGACGCAACATTGCAGCAAATGCAGATAACAAATTGCCTGCAACCTCCAGAGTTGCTAAATCCAAACGCAGATTGAAGAAGTCTGAAAAGGGAATCAAGATAAAGTATGTTCCCAAACAGAAGAGAAATAACTTATGTGATGTATAG 2019 0.4032 MPIAKLKASSTPDVMDAEEKIDTIIRQTIARETSLSFPSVNDNSIHWMQLFDALDSQGWPLLYPMKVQLQNCDKCSREFCSPINYRRHIRVHHRLKKLDKDFTQTRDLLGAYWDKLSVEEAKEVVSLKNVALEKVPGSSILKSLTTLLQNQGFYAFPRYYLMAGAALLDIVQSKSSRFPISSEELFSVLDDASEKTCLCGTAESVKRYVFDGNAGKIGLEPKNLVACTSFLLEQKLVMAWLTDKDAEALKCQEQLVEEEEAAQKRQTEILERKRQKKLRQKEQKAREQRHKAEAEIEGDIDSTVKALSLTEASSDTYNFEARNPNAFSDNVASPVLLQHLDTNEEINGDTHSEYDTIADQNLERWSAHEHMGKWAEANDLHTNQISPLSKLEVNQKYEGNHDNKASAIVSGSKVWSPKSEEEIDKVVLKTTKEKEPDQLKNQEVLIGSISVNLDDDCRQSEGNMLASERDSMVENVGKQNSPRDKLMKTDRVTSGNSLSIVKVWRPVSRLETEDQVPVQSGETDDDDSVHGNVRNWSVPSCLREGSTDGDDIGFEKHFSHPEGRAYPGSFQFSIQDAKAFLAKRWEEAISSDHVTLHLTSDSESSGSQETDDSITAASQSYDDDRRNIAANADNKLPATSRVAKSKRRLKKSEKGIKIKYVPKQKRNNLCDV* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01483 672 ProSitePatterns Zinc finger C2H2 type domain signature. 72 93 IPR013087 -
Phac4g01483 672 Coils Coil 256 297 - -
Phac4g01483 672 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 666 - -
Phac4g01483 672 MobiDBLite consensus disorder prediction 599 657 - -
Phac4g01483 672 MobiDBLite consensus disorder prediction 599 625 - -
Phac4g01483 672 MobiDBLite consensus disorder prediction 511 558 - -
Phac4g01483 672 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 97 IPR013087 -
Phac4g01483 672 MobiDBLite consensus disorder prediction 277 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01483 Phac-Chr4 41070816 41078736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01483 16 665 C2H2 Transcription Factor Family AT4G25610 38.998 2.63e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac4g01483 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01483 - - gmx:100809067 898.271