LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac4g01467	ATGCCTACATGGTGGGGGAAATCATCATCAAAAGAAACCAAGAAGAAAGCAAATAAGGAAAGTTTTATCAATACATTTCACCGAAAATTTAAAATCCCATCTGAAAGTAAATCCAGCAGTAGATCTGGAGGATCTCGTAGACAATGCAATGATTCAATTTCTGAGAAAGGGGCTCAGTCTCCTCTTGAATCAAGATCTCCTTCACCTTCCAAAGTGGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCACTACCACTTCCTGTCCTGCACCCGTCAAATATAAGCCGAGCAGATTCTGAAATTAGCATATCAGCTAAATCAAGACTTGAAAAAGGCTCCAAACCATCATTGTTTCCACTACCAAAACCAGCATGCATGCGGGGTAGGCTGAACCCTGCTGATTTGGATGGAGATCTGGTCACTGCTTCAGTCTCTAGTGAGAGCTCTGCTGACAGTGATGAGCCAGTGGACTCTCGCAATCGTAGTCCTTTGGCAACCGACTGTGAAAATGGGACTAGAACTGCTGCAGGCAGTCCTTCCAGCTCGATGCCCAAGGATCTATCATCTACTGTTTCCCAAATAAATTCAAGAGAAACCAAAAAACCGGCAAACATTCTGGGTAATCACATGTCTTCTACTTCACCAAAACGGAGGCCTTTAAGCAACCATGTTTCAAATTTGCAGATTCCTCCTCATGGTGCCTTCTGCAGTGCACCTGATAGTTCCAAATCAAGTCCATCAAGAAGTCCGTTGAGAGTATTTGGCACAGAAAAGGTGTTGAACTCTGCCTTTTGGGCCGGAAAGCCGTATTCGGAGGTCAATTTAGGTGGATCTGGGCACTGCTCAAGTCCAGGTTCTGGTCACAATTCTGGACATAATTCAATGGGAGGGGACATGTCAGGACAGTTATTTTGGCAACCTAGCAGGGGTAGCCCCGAATATTCTCCTGTACCTAGTCCCAGAATGACTAGCCCTGGACCTAGCTCTAGAATTCAGAGTGGTGCTGTTACACCTATTCATCCTAGAGCTGGGGGAACACTCAATGAATCACAGACAGGACGAGTTGATGATGGAAAACAACAGAGTCATCGTTTGCCCCTTCCTCCTTTAGCAGTGACCAATACTTTACCTTTCTCTCATTCAAATTCTGCAGCAACTTCTCCATCCATGCCAAGAAGTCCAGGAAGAGCAGATAATCCAATAAGCCCTGGATCACGTTGGAAAAAAGGAAAACTGCTTGGCAGAGGCACATTTGGACATGTTTTTGTTGGCTTTAATAAGGAAAGTGGTGAAATGTGTGCTATGAAAGAGGTGACTCTGTTTTCAGATGATGCCAAATCTAAAGAAAGTGCTAAGCAATTAATGCAGGAAATTACCTTATTAAGTCGATTGCGGCATTCAAATATTGTGCAGTATTATGGTTCTGAAACAGTAGGTGACAAACTTTACATATATCTGGAGTATGTCGCTGGAGGCTCCATATATAAACTTCTTCAAGAGTATGGACAATTTGGTGAACTAGCTATTCGTAGTTTTACTCAACAAATTTTGTCAGGACTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAAGGAGCAAACATACTGGTAGATACTAATGGTCGGGTTAAGTTGGCAGACTTTGGCATGGCAAAACATATAACAGGGCAATCATGTCCATTATCATTCAAGGGAAGCCCCTATTGGATGGCTCCTGAGGTTATAAAAAACTCCAATGGTTGCAACCTTGCTGTTGATATATGGAGCCTAGGATGCACAGTTTTGGAAATGGCCACAACTAAACCTCCTTGGAGTCAGTTTGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTACCAACAATCCCGGATCACCTATCTAGTGAAGGAAAGGATTTTGTTAGGAAATGCCTACAACGGAATCCACACAATCGCCCTTCAGCAAGTGAATTATTGGACCACCCTTTTGTAAAACATGCTGCACCTTTAGAAAGACCTATTCTGGGTCCTGATGGTTCTTCAGACCCAGCTGTATCTGGGATCACACAGGGAGCTACAGCTCTGGGTATTGGACAAGGAAGGAATCCCTCTACATTGGATTCAGATAGACTTTCCCGTCATTCTTCTAGGTTTTTGAAAACTAATCCTCATGCAAGTGAAATCCATATTCCGAGGAATATATCCTGTCCTGTCTCACCCATTGGAAGCCCACTTTTGAGGCCAAGATCTCCGCAGCATATGAATGGTAGAATGTCTCCTTCTCCTATATCCAGCCCTCGGACTGCTTCTGGTGCATCCACACCTCTCAACGGTGGTAGTGGTGCCATTCCATTTAGTAATCACTTGGTTTACATTCAAGAGGGTCTTGGAAACTTGCCAAAGTCCTCAAATGGTGTCTACATTATTGGCCCTAATCATCATGACTTGAACGTTGATATTTTTCGAGGAATGCAACAGACGCCTCACATTACATCAGAACCGGTTCCAAGTGAAAGTGATGTTCTGGGGAAGCAGTTTGCACGGTCTCCTCGTAGTGAGCCATATGATGTTCAATCAGTCTTGGCTGATCGTGTTTGTCGGCAGCTGCTGGGGGATAATGTGAAAATCAACCCATCCCTTGATCTAAATCCCAATTCTTTGCTCAGCTGGGCTAATGGGTTATGA	2691	0.4392	MPTWWGKSSSKETKKKANKESFINTFHRKFKIPSESKSSSRSGGSRRQCNDSISEKGAQSPLESRSPSPSKVARCQSFAERPHAQPLPLPVLHPSNISRADSEISISAKSRLEKGSKPSLFPLPKPACMRGRLNPADLDGDLVTASVSSESSADSDEPVDSRNRSPLATDCENGTRTAAGSPSSSMPKDLSSTVSQINSRETKKPANILGNHMSSTSPKRRPLSNHVSNLQIPPHGAFCSAPDSSKSSPSRSPLRVFGTEKVLNSAFWAGKPYSEVNLGGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTLNESQTGRVDDGKQQSHRLPLPPLAVTNTLPFSHSNSAATSPSMPRSPGRADNPISPGSRWKKGKLLGRGTFGHVFVGFNKESGEMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLRHSNIVQYYGSETVGDKLYIYLEYVAGGSIYKLLQEYGQFGELAIRSFTQQILSGLAYLHAKNTVHRDIKGANILVDTNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQFEGVAAMFKIGNSKELPTIPDHLSSEGKDFVRKCLQRNPHNRPSASELLDHPFVKHAAPLERPILGPDGSSDPAVSGITQGATALGIGQGRNPSTLDSDRLSRHSSRFLKTNPHASEIHIPRNISCPVSPIGSPLLRPRSPQHMNGRMSPSPISSPRTASGASTPLNGGSGAIPFSNHLVYIQEGLGNLPKSSNGVYIIGPNHHDLNVDIFRGMQQTPHITSEPVPSESDVLGKQFARSPRSEPYDVQSVLADRVCRQLLGDNVKINPSLDLNPNSLLSWANGL*	897

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac4g01467	896	MobiDBLite	consensus disorder prediction	283	312	-	-
	Phac4g01467	896	MobiDBLite	consensus disorder prediction	36	73	-	-
	Phac4g01467	896	MobiDBLite	consensus disorder prediction	756	781	-	-
	Phac4g01467	896	SMART	serkin_6	410	666	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac4g01467	896	Pfam	Protein kinase domain	411	666	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac4g01467	896	MobiDBLite	consensus disorder prediction	1	254	-	-
	Phac4g01467	896	ProSitePatterns	Protein kinases ATP-binding region signature.	416	439	IPR017441	GO:0005524
	Phac4g01467	896	ProSiteProfiles	Protein kinase domain profile.	410	666	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac4g01467	896	MobiDBLite	consensus disorder prediction	9	35	-	-
	Phac4g01467	896	Gene3D	Transferase(Phosphotransferase) domain 1	408	676	-	-

Showing 1 to 10 of 18 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac4g01467	Phac-Chr4	40691696	40699382	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac4g01467	1	886	MAP Kinase Kinase Kinase	AT1G63700	59.888	0.0	904

Showing 1 to 1 of 1 entries

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Phac4g01467		Pkinase	3.2e-72	CL0016

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac4g01467	K20717		-	gmx:100819762	1582.39

Showing 1 to 1 of 1 entries