Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01453 ATGCAAGAGTTGCAAGAAGAAGATGAGTGCTACAAAGATTATCTCAAAGAAAACAACACCAAATCAAAGGGTTGCAAGGGTGTAGAGTGTGAAAGTTCTACAAGTTCTATCATTGAAGATTTGACTTTTGTTTCTGATGTGAGTAAAAAGAATGAGAGAAAGAGATGCAACAATTGCAAGAAGAAGATTGGGTTATTAGGGTTCCAATGTCGTTGTGGAGATGTTTTCTGTGGATCACATAGATATCCAGAAATGCATGCATGCAAAATAGATTGGAAGGAAATTGGTCGTGAAGTTTTGATTAAACAAAATCCTTTATGCATTAGTGATAAGTTAAAACATAGAATTTAG 351 0.3447 MQELQEEDECYKDYLKENNTKSKGCKGVECESSTSSIIEDLTFVSDVSKKNERKRCNNCKKKIGLLGFQCRCGDVFCGSHRYPEMHACKIDWKEIGREVLIKQNPLCISDKLKHRI* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01453 116 Pfam AN1-like Zinc finger 56 90 IPR000058 GO:0008270
Phac4g01453 116 ProSiteProfiles Zinc finger AN1-type profile. 50 96 IPR000058 GO:0008270
Phac4g01453 116 Gene3D - 30 110 IPR035896 -
Phac4g01453 116 FunFam Zinc finger AN1-type containing 6 28 111 - -
Phac4g01453 116 SMART AN1_Zf_4 56 93 IPR000058 GO:0008270
Phac4g01453 116 PANTHER AN1-TYPE ZINC FINGER PROTEIN 39 113 - -
Phac4g01453 116 SUPERFAMILY AN1-like Zinc finger 47 110 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01453 Phac-Chr4 40240778 40242988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01453 44 113 C2H2 Transcription Factor Family AT3G52800 47.143 9.94e-22 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01453 - - pvu:PHAVU_004G110800g 189.119