Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01439 ATGCTTTCCAGAGCTGCTTTGCTTAAAATGTTTTCTCCTTATGGAAAGATAATTTCTGAGGACTTCCTATGGCACACACGTGGCCCAAAACGCGGGGAACCACGTGGTTTTGCTTTTATCCAGTATAGCACAAAAGAGGAAGCAGAATTAGCCAAGGAGAAAATGCATGGGAGGTTTGCCTGCGGCCGTCCACTGGTTGTTCGTCTTGCCGGTGAGAAGTGCTTGTTGGAAACAGCTGATAAGTCTACAAAAGCAGCAAGTGAAGGACAGAAGATGCTTCTCATTGGTGGTGGTGGTGCCATGGGACAGACAAGTCGTACTGCAAAAATAGCTGCTATAAAAAATAAATTAAAATCCTTGGAGGAGGAGAGTTCTAGGACGAAGAAGCAGAAGCAAAATGGCAACATTTCTTGA 414 0.4469 MLSRAALLKMFSPYGKIISEDFLWHTRGPKRGEPRGFAFIQYSTKEEAELAKEKMHGRFACGRPLVVRLAGEKCLLETADKSTKAASEGQKMLLIGGGGAMGQTSRTAKIAAIKNKLKSLEEESSRTKKQKQNGNIS* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01439 137 Gene3D - 2 83 IPR012677 -
Phac4g01439 137 MobiDBLite consensus disorder prediction 118 137 - -
Phac4g01439 137 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 29 130 - -
Phac4g01439 137 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 65 IPR000504 GO:0003723
Phac4g01439 137 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 72 IPR000504 GO:0003723
Phac4g01439 137 Coils Coil 110 130 - -
Phac4g01439 137 SMART rrm1_1 2 68 IPR000504 GO:0003723
Phac4g01439 137 SUPERFAMILY RNA-binding domain, RBD 6 74 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01439 Phac-Chr4 39988724 39991179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01439 7 73 Eukaryotic Initiation Factors Gene Family AT1G71770 40.299 2.19e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01439 K24527 - gmx:100806572 241.891