Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01427 ATGAATAAGCTTTCACTGCTAAATCCTAATTTCGTTTCTGTGGCGGTGAATCCTAATGCAATGCAAGTATGCCATCGTGACTTAAAGTTGGAGAACACATTGTTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTCAGGTATTCGAAGTCCTCTGTACTACATTCACAACCAAAATCTACAGTCGGTACCCCTGCATACATTGCTCCTGAAGTTTTGCTTAAGAAAGAATATGATGGCAAGGTGCATATCCTTTTGAGGATCCAGGGGAACCTACAAATTTCCGAAAGACGATTCAGAGGATTTTGA 315 0.4095 MNKLSLLNPNFVSVAVNPNAMQVCHRDLKLENTLLDGSPAPRLKICDFRYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVHILLRIQGNLQISERRFRGF* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01427 104 PANTHER SERINE/THREONINE KINASE 20 83 - -
Phac4g01427 104 Gene3D Transferase(Phosphotransferase) domain 1 15 86 - -
Phac4g01427 104 ProSiteProfiles Protein kinase domain profile. 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01427 104 SUPERFAMILY Protein kinase-like (PK-like) 21 84 IPR011009 -
Phac4g01427 104 Pfam Protein kinase domain 21 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01427 104 ProSitePatterns Serine/Threonine protein kinases active-site signature. 23 35 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01427 Phac-Chr4 39584487 39585536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01427 23 82 CBL-interacting serine-threonine protein kinases AT4G30960 50.746 4.95e-11 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Phac4g01427 Pkinase 3.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01427 K14498 - ahf:112779146 134.42