Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01370 ATGTCTGCTTTGTTTGGTTCCTTTTCAATGCTTTCTTCAGCTGGAGAATCAAGAGGAATTGTGCGTCAACAAAGCAGTGCTACTATAAGTTCCAATCTTCCAAAGCTTAAGAGGAATGCTTCTGCTGCATCTGATATAAGTAGCACTGCTTCCCAGTGTGGTCCAACATTTCCAGCACGTTTGAAGCGCACAAGTAGCTTGTGTTTTGATGAGAAGCTCTTTGTGCAGGCACTTTATAAGCTTTTGGTTTCTTTCTCAGAAACTAGTTCCATCATTTTATACATAAGGGATGTTGAGAAGCTCCTTCTTCAGTCAAGGTTATATAATTTACTACAAAAAATGATAAATAAACTATCAGGCTCGGTGTTGATACTTGGGTCCCAGATATTAGATTCAGATGACGATTGCAAAGAAGTTGATGAAAGACTCACTGCGTTATTCCCCTACAACATTGAGATCAAAGCTCCTGAAGATGAAACTCACTCTGGCAATTGGAAAGGATCACTGGAAGACGATATGAAAGCTATTCAGTTCCAAGACAACAGAAACCACATTGCTGAAGTACTAGCAGCAAATGACATTGACTGTGATGACTTGAACTCAGTCTGCTTTTCAGATACTATCTTACTCAGCAATTATATTGAAGAAATTGTAGTATCTGCAATATCTTACCATTTGATGAAAACCAAGGATCCAGAATACCGAAATGGAAAGTTAGTTATATCAGCCAATAGTTTGTCCCATGGATTGAGTCTGTTCCAGGAAGGCAAGAGTAGTGGGAATCTGAAGACTAATGAATCTAACAAGGAAAATGCTGGGGAAGATATTTCTGGTGCAAAGAATGAAGTTAAGTCTGACAATCAAGCACCCGAAAACAAGAATGAGGCAGAGAAATCCATCCCGGTAACAAAGAAAGATGGCGAAAATCCTGCACCTTCCAAAGCGGAAGTTCCTGACAACGAGTTTGAGAAGCGCATAAGACCTGAGGTTATCCCTGCAAATGAGATAGGGGTTACATTTGCAGATATTGGTGCATTGGATGAGATCAAAGAGTCACTTCAAGAGCTGGTAATGCTTCCCCTTAGAAGGCCTGACCTCTTCAAAGGTGGGCTTCTAAAGCCGTGTAGAGGTATATTGCTTTTTGGGCCTCCTGGTACTGGGAAAACAATGCTAGCAAAAGCCATTGCAAATGAAGCTGGTGCAAGTTTCATTAATGTCTCAATGTCAACTATTACATCAAAGTGGTTTGGAGAAGATGAAAAGAACGTCCGAGCTCTATTCACACTGGCAGCTAAGGTTTCTCCAACAATCATCTTTGTTGACGAGGTTGACAGCATGCTTGGACAGAGGACTAGAGTAGGAGAGCATGAGGCCATGAGGAAGATAAAAAATGAGTTCATGACACATTGGGATGGGCTATTAACAGGACCTAATGAGCAAATTTTGGTTCTCGCTGCAACCAACAGACCATTTGACCTTGATGAAGCTATTATCAGACGATTTGAACGCAGGGTCCTGGTTGGTCTTCCATCTGCTGAGAACAGGGAAATGATCTTGAAGACTCTTCTGGCTAAAGAAAAACATGAAAACTTAGACTTCAAAGAGCTGGCAACCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCATCACTGCGGCTTATCGACCTGTTAGAGAGCTAATACAGCGGGAGAGAATGAAGGAAATGGAAAAGAAGAAAAGAGAGGCTGAAGGCCAAAACTCTGAAGATGCTTCAAACAATAAAGATAAGGAAGACCAAGAGATTACCCTCAGGCCTTTGAATATGGAAGACATGAAGCAGGCTAAGAGTCAGGTGGCTGCAAGTTTTGCATCAGAAGGATCCGTAATGAATGAGTTGAAGCAGTGGAATGATTTATATGGAGAAGGAGGTTCAAGGAAGAAGCAACAACTCACTTACTTCCTTTAG 1956 0.4126 MSALFGSFSMLSSAGESRGIVRQQSSATISSNLPKLKRNASAASDISSTASQCGPTFPARLKRTSSLCFDEKLFVQALYKLLVSFSETSSIILYIRDVEKLLLQSRLYNLLQKMINKLSGSVLILGSQILDSDDDCKEVDERLTALFPYNIEIKAPEDETHSGNWKGSLEDDMKAIQFQDNRNHIAEVLAANDIDCDDLNSVCFSDTILLSNYIEEIVVSAISYHLMKTKDPEYRNGKLVISANSLSHGLSLFQEGKSSGNLKTNESNKENAGEDISGAKNEVKSDNQAPENKNEAEKSIPVTKKDGENPAPSKAEVPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTGPNEQILVLAATNRPFDLDEAIIRRFERRVLVGLPSAENREMILKTLLAKEKHENLDFKELATMTEGYTGSDLKNLCITAAYRPVRELIQRERMKEMEKKKREAEGQNSEDASNNKDKEDQEITLRPLNMEDMKQAKSQVAASFASEGSVMNELKQWNDLYGEGGSRKKQQLTYFL* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01370 651 MobiDBLite consensus disorder prediction 256 320 - -
Phac4g01370 651 Gene3D - 337 619 IPR027417 -
Phac4g01370 651 MobiDBLite consensus disorder prediction 268 320 - -
Phac4g01370 651 SMART AAA_5 374 511 IPR003593 GO:0016887
Phac4g01370 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 337 571 IPR027417 -
Phac4g01370 651 ProSitePatterns AAA-protein family signature. 481 500 IPR003960 GO:0005524|GO:0016887
Phac4g01370 651 MobiDBLite consensus disorder prediction 570 596 - -
Phac4g01370 651 Pfam ATPase family associated with various cellular activities (AAA) 378 508 IPR003959 GO:0005524|GO:0016887
Phac4g01370 651 Coils Coil 562 589 - -
Phac4g01370 651 Pfam AAA+ lid domain 530 574 IPR041569 -
Phac4g01370 651 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 337 513 - -
Phac4g01370 651 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 57 650 - -
Phac4g01370 651 Gene3D - 510 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01370 Phac-Chr4 35152270 35159553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01370 338 569 Calmodulin-binding Proteins AT3G56690 38.983 3.31e-42 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01370 - - gmx:100804099 1177.54